Gene detail

Detail information of GWHGAAEX014518/evm.TU.scaffold_6.30

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|189220077\|ref\|YP_001940717.1\|	7.00E-07	hypothetical protein Minf_2066 [Methylacidiphilum infernorum V4]
nr	gi\|743873953\|ref\|XP_010906956.1\|	2.57E-160	PREDICTED: uncharacterized protein LOC105033746 isoform X3 [Elaeis guineensis]
trEMBL	tr\|M0RQL0\|M0RQL0_MUSAM	6.00E-159	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P08800_001}
trEMBL	tr\|M0RQL0\|M0RQL0_MUSAM	3.00E-105	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P08800_001}
TAIR	AT3G27470	3.00E-148	Protein of unknown function (DUF707)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000003	1641766	1703914	+

Transcript Sequence
>GWHTAAEX014518 ATGCGAGGAGATAGCTGGGAGGTGCTGGAGCTCCGAGCAGAGGATAAAGAAGGGACAGAAAGTCTGGCACCGGGAATTCTTGTGCCCGAGTCGGATTTTTTTCTTCATCGATTATGGGATATTCCAAGTGAGGATCTTGACATACAACAAAAGTACCTTGTGGCATTTACTGTTGGATACGATCAAAAGGATAATATTAATGCAGCAATAAAGAAGGTTTCTGGAAATTTTACCATCCTGTTATTTCATTACGACGAGCGGACGAGCGAATGGGGAGAATTTGAGTGGTCGAAACGGGCCATCCATCTTGTAGCTTGCTACGAGTACATCTTTGTATGGGACGAAGATCTCGGAGTAGATCATTTCAATGCCGAAGAGTACATCGAAGTGGTGAGGAAGCATGGTTTGGAGATTTCGCAGCCTGGTTTGGAGCCAAACGAACGGTTATCATGGAAAATGACAAAGAGAAGAACTGATGGAGAAATTCATAAGTCAATAGTGGAGAAGCCTGGCAGATGCAGAGATCCCCACCAGCCACCATGCGCTGCATTTGTAGAGATAATGGCACCTGTCTTCTCACGCAATACATGGAGATGTGTTTGGCATATAATTCAGAATGATTTGGTTCATGGATGGGGCCTTGATTTTGCTTTAAGAAAATGCGTGGAGCTGCGTTTTCCATTCAGTATTATTTCATTCCGTCAAGCTAAGAAATCAAGCATCACAACTGAAGTCTTATTCAATGCTACTTCAAAGATATATGTTCCCACAAATCCTAAAGGGACAGAACGTTTGGCACCTGGGATTATTATGCCTGAATCAGATTTTTATCTTCGTCGATTATGGGGTAATCCAAGTGAGGATCTCAATATACAACAAAAGTACCTTGTAGCATTTACAGTTGGATATGATCAAAAGGATATTATTGATGCAATGGTGAAAAAGTTCTCTGAAAATTTTACCATCATTCTGTTTCATTACGATGGGCGCACGAGCGAATGGGAAGAATTTGAGTGGTCGAAGAGGGCGATTCACGTGAGTGCAAGGAAGCAATCCAAATGGTGGTACGCCAAACGGTTTCTGCATCCTGACATTGTAGCTTGCTACGAGTACATCTTTGTATGGGACGAAGATCTCGGAGTAGATCATTTCAATGCCGAAGAGTACATCAAAGTGGTGAGGAAGCATGGTTTGGAGATTTCGCAGCCTGCATTGGAGCCAAGAAATGGAATGTCATGGGAAATAACTAAAAGAATGGACGGTGTGGAAATTCACAAGGAATTAAAGAACAGGCTCGTCAAATGCACTCACCCTTTCCTGCCTCCATGCGCTGCCTTTGTAGAGATCATGGCACCTGTCTTCACAAGTAAAGCTTGGAGATGCGCATGGCATATGATTCAGAATGATTTGATTCATGGATGGGGCCTGGATTACTCATGGAGAAGATGTGTGGAGAATGGGCATGAGAATATTGGCATTGTGGATGCTCAATGGATTGATCATAAGAGAATTTCTTTGCTCAAGAATCAAGGAAAGACGGAGGGCAAAGATCACTCGCAAGAGGTGACAGACCGTTGCTTGAAGGAGGCGGAAATATTTGCAGCTCGCTTAGAAAATGCGGAGAAAGCTTATATGAAAAATAAAAAGATTCTTCTATAG

Network for GWHGAAEX014518

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05212.11	DUF707	16	223	6.80E-84
PF05212.11	DUF707	257	542	1.70E-128

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.130
SRP064423	SRR2545915	Juvenile tuber	0.420
SRP108465	SRR5643513	five period of Gastrodia elata	13.890
	SRR5643514	five period of Gastrodia elata	6.590
	SRR5643515	five period of Gastrodia elata	6.320
	SRR5643524	five period of Gastrodia elata	5.900
	SRR5643525	five period of Gastrodia elata	0.230
	SRR5643528	five period of Gastrodia elata	0.840
	SRR5643658	five period of Gastrodia elata	0.330
	SRR5643659	five period of Gastrodia elata	0.720
	SRR5643660	five period of Gastrodia elata	0.910
	SRR5643661	five period of Gastrodia elata	0.970
	SRR5643662	five period of Gastrodia elata	4.250
	SRR5643663	five period of Gastrodia elata	1.690
	SRR5643664	five period of Gastrodia elata	2.820
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.730
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	14.130
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.840
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.230
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.910
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.400
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.360
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.440
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.410
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	26.110
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	26.110
SRP279888	Gastro	Gastrodia elata tuber	0.56
	Juven	Juvenile tuber	1.42
	Mother_Gastro	Mother tuber of Gastrodia elata	2.00
	Mother_Juven	Mother tuber of Juvenile	2.71