Detail information of GWHGAAEX014525/evm.TU.scaffold_6.44


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33412.00E-106RNA polymerase II transcription factor complex subunit
nrgi|743767601|ref|XP_010914068.1|1.97E-166PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Elaeis guineensis]
Swissprottr|Q5M759|VP221_ARATH9.00E-155Vacuolar protein sorting-associated protein 22 homolog 1
trEMBLtr|M0RKV2|M0RKV2_MUSAM2.00E-164Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P23770_001}
TAIRAT4G270402.00E-106EAP30/Vps36 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000328580522878892-
Transcript Sequence

Network for GWHGAAEX014525

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04157.15EAP3062256.80E-79
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12188SNF8, EAP30 Endocytosis map04144

Gene Ontology

GO term OntologyName
GO:0071985Biological Processmultivesicular body sorting pathway
GO:0000814Cellular ComponentESCRT II complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.920
SRR2545915Juvenile tuber16.260
SRP108465SRR5643513five period of Gastrodia elata33.180
SRR5643514five period of Gastrodia elata33.750
SRR5643515five period of Gastrodia elata30.920
SRR5643524five period of Gastrodia elata34.360
SRR5643525five period of Gastrodia elata31.640
SRR5643528five period of Gastrodia elata35.350
SRR5643658five period of Gastrodia elata34.030
SRR5643659five period of Gastrodia elata28.500
SRR5643660five period of Gastrodia elata28.400
SRR5643661five period of Gastrodia elata26.300
SRR5643662five period of Gastrodia elata28.640
SRR5643663five period of Gastrodia elata30.520
SRR5643664five period of Gastrodia elata23.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.200
SRR6049655Rhizomagastrodiae_C368-T10_good_127.120
SRR6049656Rhizomagastrodiae_C368-T07_good_133.420
SRR6049657Rhizomagastrodiae_C368-T07_good_132.110
SRR6049658Rhizomagastrodiae_C368-T04_good_132.560
SRR6049659Rhizomagastrodiae_C368-T04_good_127.640
SRR6049660Rhizomagastrodiae_C368-T01_good_129.460
SRR6049661Rhizomagastrodiae_C368-T04_good_126.440
SRR6049662Rhizomagastrodiae_C368-T01_good_129.890
SRR6049663Rhizomagastrodiae_C368-T01_good_132.050
SRR6049664Rhizomagastrodiae_C368-T10_good_134.150
SRR6049665Rhizomagastrodiae_C368-T10_good_134.150
SRP279888GastroGastrodia elata tuber 34.65
JuvenJuvenile tuber38.34
Mother_GastroMother tuber of Gastrodia elata 44.07
Mother_JuvenMother tuber of Juvenile 36.16