Detail information of GWHGAAEX014549/evm.TU.scaffold_6.82


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|284034329|ref|YP_003384260.1|2.00E-18hypothetical protein Kfla_6464 [Kribbella flavida DSM 17836]
nrgi|743883643|ref|XP_010909474.1|1.75E-82PREDICTED: F-box protein SKIP8 isoform X2 [Elaeis guineensis]
trEMBLtr|M0RQW2|M0RQW2_MUSAM2.00E-81Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P09820_001}
TAIRAT3G092505.00E-60Nuclear transport factor 2 (NTF2) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000353075695313636-
Transcript Sequence

Network for GWHGAAEX014549

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13474.5SnoaL_31242383.70E-17
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.510
SRR2545915Juvenile tuber12.830
SRP108465SRR5643513five period of Gastrodia elata25.130
SRR5643514five period of Gastrodia elata25.770
SRR5643515five period of Gastrodia elata20.660
SRR5643524five period of Gastrodia elata22.300
SRR5643525five period of Gastrodia elata13.700
SRR5643528five period of Gastrodia elata7.700
SRR5643658five period of Gastrodia elata12.190
SRR5643659five period of Gastrodia elata16.450
SRR5643660five period of Gastrodia elata15.600
SRR5643661five period of Gastrodia elata11.200
SRR5643662five period of Gastrodia elata8.080
SRR5643663five period of Gastrodia elata9.600
SRR5643664five period of Gastrodia elata6.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.200
SRR6049655Rhizomagastrodiae_C368-T10_good_115.180
SRR6049656Rhizomagastrodiae_C368-T07_good_125.450
SRR6049657Rhizomagastrodiae_C368-T07_good_124.610
SRR6049658Rhizomagastrodiae_C368-T04_good_128.630
SRR6049659Rhizomagastrodiae_C368-T04_good_126.470
SRR6049660Rhizomagastrodiae_C368-T01_good_128.880
SRR6049661Rhizomagastrodiae_C368-T04_good_124.990
SRR6049662Rhizomagastrodiae_C368-T01_good_126.830
SRR6049663Rhizomagastrodiae_C368-T01_good_128.640
SRR6049664Rhizomagastrodiae_C368-T10_good_119.870
SRR6049665Rhizomagastrodiae_C368-T10_good_119.870
SRP279888GastroGastrodia elata tuber 18.61
JuvenJuvenile tuber18.12
Mother_GastroMother tuber of Gastrodia elata 14.52
Mother_JuvenMother tuber of Juvenile 7.83