Detail information of GWHGAAEX014550/evm.TU.scaffold_6.84


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG19879.00E-08Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains
nrgi|672120252|ref|XP_008783387.1|5.95E-15PREDICTED: uncharacterized protein LOC103702651 [Phoenix dactylifera]
Swissprottr|Q680K8|Y1576_ARATH3.00E-08BTB/POZ domain-containing protein At1g55760
trEMBLtr|J3MPK7|J3MPK7_ORYBR4.00E-10Uncharacterized protein {ECO:0000313|EnsemblPlants:OB08G10360.1}
TAIRAT1G557609.00E-08BTB/POZ domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000355393765541179-
Transcript Sequence

Network for GWHGAAEX014550

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00651.30BTB14611.30E-05
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTRAF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.370
SRR2545915Juvenile tuber2.100
SRP108465SRR5643513five period of Gastrodia elata5.270
SRR5643514five period of Gastrodia elata5.690
SRR5643515five period of Gastrodia elata4.780
SRR5643524five period of Gastrodia elata5.320
SRR5643525five period of Gastrodia elata0.820
SRR5643528five period of Gastrodia elata0.550
SRR5643658five period of Gastrodia elata1.650
SRR5643659five period of Gastrodia elata0.880
SRR5643660five period of Gastrodia elata0.600
SRR5643661five period of Gastrodia elata1.100
SRR5643662five period of Gastrodia elata1.940
SRR5643663five period of Gastrodia elata2.020
SRR5643664five period of Gastrodia elata2.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.270
SRR6049655Rhizomagastrodiae_C368-T10_good_18.510
SRR6049656Rhizomagastrodiae_C368-T07_good_17.010
SRR6049657Rhizomagastrodiae_C368-T07_good_15.510
SRR6049658Rhizomagastrodiae_C368-T04_good_16.380
SRR6049659Rhizomagastrodiae_C368-T04_good_13.540
SRR6049660Rhizomagastrodiae_C368-T01_good_13.270
SRR6049661Rhizomagastrodiae_C368-T04_good_15.690
SRR6049662Rhizomagastrodiae_C368-T01_good_12.820
SRR6049663Rhizomagastrodiae_C368-T01_good_12.200
SRR6049664Rhizomagastrodiae_C368-T10_good_14.070
SRR6049665Rhizomagastrodiae_C368-T10_good_14.070
SRP279888GastroGastrodia elata tuber 0.98
JuvenJuvenile tuber0.71
Mother_GastroMother tuber of Gastrodia elata 1.78
Mother_JuvenMother tuber of Juvenile 1.64