Detail information of GWHGAAEX014568/evm.TU.scaffold_6.119


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33351.00E-54Predicted coiled-coil protein
nrgi|225443566|ref|XP_002273293.1|1.20E-62PREDICTED: OPA3-like protein [Vitis vinifera]
trEMBLtr|D7TJF6|D7TJF6_VITVI4.00E-63Putative uncharacterized protein {ECO:0000313|EMBL:CBI30628.3}
TAIRAT1G285101.00E-54Optic atrophy 3 protein (OPA3)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000381728868182730+
Transcript Sequence

Network for GWHGAAEX014568

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07047.11OPA341243.10E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.270
SRR2545915Juvenile tuber20.230
SRP108465SRR5643513five period of Gastrodia elata17.200
SRR5643514five period of Gastrodia elata16.530
SRR5643515five period of Gastrodia elata16.870
SRR5643524five period of Gastrodia elata18.920
SRR5643525five period of Gastrodia elata19.100
SRR5643528five period of Gastrodia elata16.150
SRR5643658five period of Gastrodia elata20.930
SRR5643659five period of Gastrodia elata16.630
SRR5643660five period of Gastrodia elata20.640
SRR5643661five period of Gastrodia elata14.820
SRR5643662five period of Gastrodia elata17.190
SRR5643663five period of Gastrodia elata20.970
SRR5643664five period of Gastrodia elata17.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.830
SRR6049655Rhizomagastrodiae_C368-T10_good_118.480
SRR6049656Rhizomagastrodiae_C368-T07_good_115.020
SRR6049657Rhizomagastrodiae_C368-T07_good_129.090
SRR6049658Rhizomagastrodiae_C368-T04_good_120.970
SRR6049659Rhizomagastrodiae_C368-T04_good_129.970
SRR6049660Rhizomagastrodiae_C368-T01_good_120.110
SRR6049661Rhizomagastrodiae_C368-T04_good_119.260
SRR6049662Rhizomagastrodiae_C368-T01_good_116.040
SRR6049663Rhizomagastrodiae_C368-T01_good_110.510
SRR6049664Rhizomagastrodiae_C368-T10_good_114.550
SRR6049665Rhizomagastrodiae_C368-T10_good_114.550
SRP279888GastroGastrodia elata tuber 14.20
JuvenJuvenile tuber27.32
Mother_GastroMother tuber of Gastrodia elata 26.14
Mother_JuvenMother tuber of Juvenile 26.74