Detail information of GWHGAAEX014569/evm.TU.scaffold_6.120


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33359.00E-70Predicted coiled-coil protein
nrgi|225443566|ref|XP_002273293.1|1.18E-76PREDICTED: OPA3-like protein [Vitis vinifera]
trEMBLtr|D7TJF6|D7TJF6_VITVI4.00E-77Putative uncharacterized protein {ECO:0000313|EMBL:CBI30628.3}
TAIRAT1G285109.00E-70Optic atrophy 3 protein (OPA3)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000381847728193989-
Transcript Sequence

Network for GWHGAAEX014569

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07047.11OPA331253.60E-43
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms48.420
SRR2545915Juvenile tuber47.460
SRP108465SRR5643513five period of Gastrodia elata32.900
SRR5643514five period of Gastrodia elata32.130
SRR5643515five period of Gastrodia elata28.790
SRR5643524five period of Gastrodia elata33.110
SRR5643525five period of Gastrodia elata29.370
SRR5643528five period of Gastrodia elata31.670
SRR5643658five period of Gastrodia elata22.570
SRR5643659five period of Gastrodia elata51.660
SRR5643660five period of Gastrodia elata55.570
SRR5643661five period of Gastrodia elata59.430
SRR5643662five period of Gastrodia elata60.040
SRR5643663five period of Gastrodia elata60.840
SRR5643664five period of Gastrodia elata63.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.690
SRR6049655Rhizomagastrodiae_C368-T10_good_137.870
SRR6049656Rhizomagastrodiae_C368-T07_good_126.460
SRR6049657Rhizomagastrodiae_C368-T07_good_123.570
SRR6049658Rhizomagastrodiae_C368-T04_good_116.370
SRR6049659Rhizomagastrodiae_C368-T04_good_118.380
SRR6049660Rhizomagastrodiae_C368-T01_good_117.380
SRR6049661Rhizomagastrodiae_C368-T04_good_114.890
SRR6049662Rhizomagastrodiae_C368-T01_good_120.270
SRR6049663Rhizomagastrodiae_C368-T01_good_119.620
SRR6049664Rhizomagastrodiae_C368-T10_good_133.290
SRR6049665Rhizomagastrodiae_C368-T10_good_133.290
SRP279888GastroGastrodia elata tuber 19.25
JuvenJuvenile tuber26.17
Mother_GastroMother tuber of Gastrodia elata 21.47
Mother_JuvenMother tuber of Juvenile 14.98