Detail information of GWHGAAEX014576/evm.TU.scaffold_6.129


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|383453484|ref|YP_005367473.1|7.00E-10phosphoprotein phosphatase [Corallococcus coralloides DSM 2259]
KOGKOG16051.00E-71TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation)
nrgi|672152287|ref|XP_008797483.1|2.37E-175PREDICTED: uncharacterized protein LOC103712678 isoform X1 [Phoenix dactylifera]
Swissprottr|Q5S7T7|TIM50_PHYIN2.00E-18Mitochondrial import inner membrane translocase subunit TIM50 (Precursor)
trEMBLtr|U5GX66|U5GX66_POPTR5.00E-126Uncharacterized protein {ECO:0000313|EMBL:ERP66447.1}
TAIRAT5G118601.00E-71SCP1-like small phosphatase 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000386808238690489+
Transcript Sequence

Network for GWHGAAEX014576

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03031.17NIF3294893.80E-54
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016791Molecular Functionphosphatase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms144.770
SRR2545915Juvenile tuber159.150
SRP108465SRR5643513five period of Gastrodia elata87.220
SRR5643514five period of Gastrodia elata96.040
SRR5643515five period of Gastrodia elata92.560
SRR5643524five period of Gastrodia elata91.230
SRR5643525five period of Gastrodia elata88.020
SRR5643528five period of Gastrodia elata105.520
SRR5643658five period of Gastrodia elata101.200
SRR5643659five period of Gastrodia elata76.520
SRR5643660five period of Gastrodia elata83.390
SRR5643661five period of Gastrodia elata68.920
SRR5643662five period of Gastrodia elata77.840
SRR5643663five period of Gastrodia elata75.480
SRR5643664five period of Gastrodia elata94.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_194.830
SRR6049655Rhizomagastrodiae_C368-T10_good_1156.290
SRR6049656Rhizomagastrodiae_C368-T07_good_1105.640
SRR6049657Rhizomagastrodiae_C368-T07_good_1104.750
SRR6049658Rhizomagastrodiae_C368-T04_good_1128.610
SRR6049659Rhizomagastrodiae_C368-T04_good_1140.020
SRR6049660Rhizomagastrodiae_C368-T01_good_1113.450
SRR6049661Rhizomagastrodiae_C368-T04_good_1112.020
SRR6049662Rhizomagastrodiae_C368-T01_good_187.590
SRR6049663Rhizomagastrodiae_C368-T01_good_1111.710
SRR6049664Rhizomagastrodiae_C368-T10_good_199.910
SRR6049665Rhizomagastrodiae_C368-T10_good_199.910
SRP279888GastroGastrodia elata tuber 110.30
JuvenJuvenile tuber128.27
Mother_GastroMother tuber of Gastrodia elata 220.35
Mother_JuvenMother tuber of Juvenile 164.51