Detail information of GWHGAAEX014577/evm.TU.scaffold_6.130
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|222151051|ref|YP_002560205.1| | 3.00E-25 | hypothetical protein MCCL_0802 [Macrococcus caseolyticus JCSC5402] |
| KOG | KOG0660 | 0 | Mitogen-activated protein kinase |
| nr | gi|620598935|gb|AHY20717.1| | 0 | mitogen-activated protein kinase [Dendrobium catenatum] |
| Swissprot | tr|Q5ZCI1|MPK10_ORYSJ | 0 | Mitogen-activated protein kinase 10 |
| trEMBL | tr|A0A023VYC8|A0A023VYC8_9ASPA | 0 | Mitogen-activated protein kinase {ECO:0000313|EMBL:AHY20717.1} |
| TAIR | AT2G42880 | 0 | MAP kinase 20 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000003 | 8760893 | 8780246 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014577
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 38 | 329 | 1.80E-67 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_MAPK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0004707 | Molecular Function | MAP kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 29.160 |
| SRR2545915 | Juvenile tuber | 44.990 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 23.830 |
| SRR5643514 | five period of Gastrodia elata | 30.630 | |
| SRR5643515 | five period of Gastrodia elata | 26.230 | |
| SRR5643524 | five period of Gastrodia elata | 26.880 | |
| SRR5643525 | five period of Gastrodia elata | 15.640 | |
| SRR5643528 | five period of Gastrodia elata | 11.000 | |
| SRR5643658 | five period of Gastrodia elata | 9.620 | |
| SRR5643659 | five period of Gastrodia elata | 23.070 | |
| SRR5643660 | five period of Gastrodia elata | 18.940 | |
| SRR5643661 | five period of Gastrodia elata | 24.530 | |
| SRR5643662 | five period of Gastrodia elata | 10.930 | |
| SRR5643663 | five period of Gastrodia elata | 17.830 | |
| SRR5643664 | five period of Gastrodia elata | 11.720 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 24.340 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 20.790 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 28.920 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 20.150 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 24.360 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.560 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 25.920 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 25.970 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 23.860 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 24.850 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 25.120 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 25.120 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 25.57 |
| Juven | Juvenile tuber | 5.28 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 8.65 | |
| Mother_Juven | Mother tuber of Juvenile | 5.16 |