Detail information of GWHGAAEX014579/evm.TU.scaffold_6.132


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|383459634|ref|YP_005373623.1|6.00E-99urease accessory protein UreG [Corallococcus coralloides DSM 2259]
nrgi|641859452|gb|KDO78142.1|3.46E-160hypothetical protein CISIN_1g023354mg [Citrus sinensis]
Swissprottr|O64700|UREG_ARATH3.00E-158Urease accessory protein G
trEMBLtr|A0A067GRU8|A0A067GRU8_CITSI1.00E-160Uncharacterized protein {ECO:0000313|EMBL:KDO78142.1}
TAIRAT2G344709.00E-158urease accessory protein G

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000389320268988480+
Transcript Sequence

Network for GWHGAAEX014579

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02492.18cobW832513.20E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006807Biological Processnitrogen compound metabolic process
GO:0003924Molecular FunctionGTPase activity
GO:0016151Molecular Functionnickel cation binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms69.780
SRR2545915Juvenile tuber109.030
SRP108465SRR5643513five period of Gastrodia elata52.430
SRR5643514five period of Gastrodia elata62.210
SRR5643515five period of Gastrodia elata56.420
SRR5643524five period of Gastrodia elata57.220
SRR5643525five period of Gastrodia elata58.450
SRR5643528five period of Gastrodia elata52.600
SRR5643658five period of Gastrodia elata54.090
SRR5643659five period of Gastrodia elata80.290
SRR5643660five period of Gastrodia elata87.040
SRR5643661five period of Gastrodia elata82.110
SRR5643662five period of Gastrodia elata86.470
SRR5643663five period of Gastrodia elata94.620
SRR5643664five period of Gastrodia elata101.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_150.560
SRR6049655Rhizomagastrodiae_C368-T10_good_154.070
SRR6049656Rhizomagastrodiae_C368-T07_good_149.430
SRR6049657Rhizomagastrodiae_C368-T07_good_153.450
SRR6049658Rhizomagastrodiae_C368-T04_good_130.230
SRR6049659Rhizomagastrodiae_C368-T04_good_129.870
SRR6049660Rhizomagastrodiae_C368-T01_good_141.650
SRR6049661Rhizomagastrodiae_C368-T04_good_136.190
SRR6049662Rhizomagastrodiae_C368-T01_good_136.520
SRR6049663Rhizomagastrodiae_C368-T01_good_131.920
SRR6049664Rhizomagastrodiae_C368-T10_good_150.520
SRR6049665Rhizomagastrodiae_C368-T10_good_150.520
SRP279888GastroGastrodia elata tuber 59.74
JuvenJuvenile tuber56.64
Mother_GastroMother tuber of Gastrodia elata 21.52
Mother_JuvenMother tuber of Juvenile 27.05