Gene detail

Detail information of GWHGAAEX014585/evm.TU.scaffold_6.142

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695009095\|ref\|XP_009391164.1\|	1.88E-128	PREDICTED: uncharacterized protein LOC103977395, partial [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0SAV2\|M0SAV2_MUSAM	3.00E-127	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P01340_001}
TAIR	AT1G73850	2.00E-105	Protein of unknown function (DUF1666)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000003	9351657	9354783	-

Transcript Sequence
>GWHTAAEX014585 ATGCACAATACCAGCCTCTGCTTCCCCTTCCCCTTTCCCTTTCCTCCCTCATCTTCATTACCCCCTTATTCTTCCCATGGCAGAAATCACCAAACTCTGATGCCTCGCCTCATTTCCTTCTTCTTCATCCTTCATCTCACCTCCTTTCTCCTCTCCAAGCTCTTCTCCTTCCTCCGCCGCAGAACCATCTCCAAGCGGGAACTCGAAGATCAAATCTGCATCTCTCCTCCTCATTTCCATCAAAACAAGCTCATTTCCATTATTGACAGTGAAGAGAGCAAGAATACCCTTCTTGTCAAACAAGTCTTCGCAGATTCCAAACCTCTGAGCTTTCTTCCAGCAGATTCCAAACCTCTGAGCTTTCTTCCCGCAGAAGATTACTCCTCCGCTCCTCAAAATGTTGCTTTTGACGCCAATGATGATGACGCTGAAGACGAGACATTGAATGAAGAAAAAAGGGGCGTTCAAGCGGAAATTGAGAATCATGAAGCGGCGAAGAAGGATTTAGCAGAGGATCCGAAGCTCGACGCGGAATCGACCTCGAAGAGCTCCATTGAATGGCCGAGCTCTACGATTATTCGTGATTCAGAGACAGAATACCCTTTCTCATCATCGTCCAGGAGGAGTTTCTCAAACTGGGAATTTTACAGTCTGTTTAAGAAATACGATGAAGAAATGCTCTTCTTTGATAGAATCAGCGCCCAAAAACTAGCAGAAACAGAATCTTTCAGGTTAATTAAAGCGCAGCCGAAATCGATATCGAAGAGAATTGCTGAAAAATTAGTGGCAAATTCCAGCAGAAGAACGAGGGATCCGTATCAGGAACTGGAGTGCGCTTATGTGGCTCAGATTTGCTTGGCTTGGGAAGCTCTTAATTGGAATTACCATAGTTACCGGAGATCAAAAGGCAGTAAATTGGACGTGGAAGAAGGATCTGTCTGCCAAGCTCATGTAGCTCAGAAATTTCAGCAGTTTCAGGTTTTGTTGCAGAGATTCATAGAGAATGAGCCGTACGAATTTGGGCGGCGCAGGCCCGAAATCTTTGCCAGGTTTAGACTTTCATCTCCCAAACTGCTTCAAGTTCCGGAATTTATAGATTTTGGAGAGAGTCATCAGCAGGAAGTGGAATCCAAGATCTCATCGGCTGAGTTTCTTTCGATATTAGAAGAAGCTGTGCAGACTTTTATGAATTTTCTAAAGGCGGATAAGAGGAGTCCGTGCGAGAGGCTTAAAGCGCTTGTAAAGAGGAAGCAAAGCCCTGTGGATCCGGCTTACCTTCGCTTGCTCAAAAAAGTTAATAAGAAAAAGAAGCAGAGGCTGGAGGAGATTGGAAGGACGTGGAAATACCCGAGGAGGAGAAGGAGGCTGAAAGAGGATGAAGAGATGGAGATTTTGATGGCCATTATAGACATGAAAGTTGTGTCCAGAGTTCTAAAGATGAGGCGGATAACTGAAGAACAGCTGCATTGGTGCGAGGATAAGATGAGCAAAGTTAGAGTGTGGGAAGGCAAAATGCAGAGAGATCACACCCCCCTTTTTTTCCCAGTACACTGATGAATGACTTGTAAAAATCTCTTCTTTTTACTAAGAAATCAAGATTGGTAGTATGATGACTAGATAAAGTGCTCTGGTTAGTATATGCGGTACCCCATCTTTTGTAAATTTTATATGAGCAGGCGATTTGGACAGATTAGAGGGCCTTGAATAGAATCTATGTTTTGAGGCAGAACAAAAGGTTTCTTGATGAGCAGTGAAAGGGAAAAGGATGGTTAGGGAAAAGCAAAAGCATGGGGATGAAGTGGTGATGGAGACAAGCACAACTTTAGCTTTCTGCCTCAACTTTATATATGAGAGAGATACTGTGGCTTTGTTCATAGTGATACTATGGTATGGCTGCACATTAAAGAGATGGAGAGAAAAGCTAATGATAGATTTTGATTAAATCTGCTACTGTGGAATGCATCAATACAACAAAAATTTGTCAAGAATGTGTTTTGCGTATGGGATTTGGACTTTTTATAGTACCC

Network for GWHGAAEX014585

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07891.11	DUF1666	274	515	4.80E-84

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	19.410
SRP064423	SRR2545915	Juvenile tuber	10.740
SRP108465	SRR5643513	five period of Gastrodia elata	2.290
	SRR5643514	five period of Gastrodia elata	1.650
	SRR5643515	five period of Gastrodia elata	2.420
	SRR5643524	five period of Gastrodia elata	1.900
	SRR5643525	five period of Gastrodia elata	1.670
	SRR5643528	five period of Gastrodia elata	3.990
	SRR5643658	five period of Gastrodia elata	1.350
	SRR5643659	five period of Gastrodia elata	3.970
	SRR5643660	five period of Gastrodia elata	3.280
	SRR5643661	five period of Gastrodia elata	4.510
	SRR5643662	five period of Gastrodia elata	4.830
	SRR5643663	five period of Gastrodia elata	4.370
	SRR5643664	five period of Gastrodia elata	4.650
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.420
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.140
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.820
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.050
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.220
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.570
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.290
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.450
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.810
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.870
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.830
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.830
SRP279888	Gastro	Gastrodia elata tuber	2.92
	Juven	Juvenile tuber	1.94
	Mother_Gastro	Mother tuber of Gastrodia elata	3.51
	Mother_Juven	Mother tuber of Juvenile	0.65