Gene detail

Detail information of GWHGAAEX014594/evm.TU.scaffold_6.162

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695055576\|ref\|XP_009415975.1\|	2.35E-20	PREDICTED: uncharacterized protein LOC103996727 isoform X1 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0TWQ4\|M0TWQ4_MUSAM	9.00E-21	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P01970_001}
TAIR	AT1G13030	2.00E-12	sphere organelles protein-related

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000003	10515582	10554592	+

Transcript Sequence
>GWHTAAEX014594 ATGGATGAACTCTGCATGAGAACACGTTTTAGCACACTTCACTGCTCAACTAAGACTGTAGCTATTAAGAACTTTCAAGGAGATTCTCTTGAAGATAAAGAAAATACTGGCCTTGATGGTCATACTGCTGTACACAAGGAAACTTCATCATGTGGATTAGTAGATGCAAAGCTCAAGAAAAAACACTGCAGTCAACATCAAACATCAGAGAATGCAACAATGGGATTTGATGATGAGCACACATCAAAAAAATGTGTAATCGGGGATGTGAATAAGAAACCATCCAGAAGTGCTAGTCGGAAGAAAGCCAAAAGATTATGGCATCGACACCATGGTTCAAAGAAAATGAAAGAGGGAGAGGAGACTCTTCAGTGGAATGGGAGAACCGAGCAAAAGTGGGGCAGGGAGAAGCCCTTTAACAAATGGAATAACGATACTTCCATTTTGTTAAACAATGGAGAATCTTCTGGATCCAAGGAAGCAAAAGAGCTCGTTGAATTCTCTAATGAAAAATCTGATGTTGAAGAAGGGGAAATTTATGACGAATCATTAGTTCCTAATCAAGAGGAGCCAATTAAAGAGTGTGGTGAAAGCAAAAATTTTACTGTTAAAGAATTTCAGTCAGCAAAGCAGCTCATAGATTTTGAGAGATTTTTGCCTCTTGTTCGTCTTCCTGAGGTACGTGGGTACTGTAGTTCACCATGGTTTTTCTTCTATATATTTATAAAAACACGCCTTAACTTAGCGTTTGATATGCTGTATATACAATGCTTAATGATATCATTATTCTTCATAACCAAAACAGGTGTTTTCACTAACGCATCTCTGTCTACATTCATGAATAATCAAAATAAACTGAATTTGCTACAGGAAGGTGATGTACTAGTCTACCGTTCGCTTAAGACATCATCTTCTTCATGGTGTCAAGAGTTCTCCCCTTTTCGAGTTGGCAGGGTTTCATCATATGACTGCAGCACTACAAAAGTTATTCTACTGCCACTCCCTGAATACCCCCATACGCCAGAAAAAGAGATGCCTGGGGAAGGGGAAGAAAGTTGCTGCCTTTATAAAGAGGATGGAACTCTGGAGGTTAAGTTGTCATCAAATGTGGATGTGCGCCTGTTTAAAGCTCGTGAATCATCAGACAGTACCCCAACACTATTCCAATAGAAGAAATGCAGAATGATGCTGCAGTAAACAACCAGGAAATGCAGAATGCTGCTCCCAACCATGCTGAACCAGGCCTGTTTGTCTTACAAAAACTTTATTACTAATGACTAGGCCTCTGTTTTTCTGATGACTCAACAGAAGGCCTTGATGCCTTGGCATTTACAATCACAAAATAGGATTGTTGGATTATTTGCATACAATTCTTTTTTGCCAACCAGAATGCCATCGCATCAAAGACTGTCTGAGATGCTTTTTCAGTATGACAGTATTTCATATTGTTTTTCCATCTTTAATACCTGTCACACAATGCTGTGAAATAGTTATGGTTTAAATTTATTTTCTTATAAAGTTTAAATAATTTTTTTTAATAATGATAGAAATTGT

Network for GWHGAAEX014594

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	26.500
SRP064423	SRR2545915	Juvenile tuber	26.100
SRP108465	SRR5643513	five period of Gastrodia elata	9.150
	SRR5643514	five period of Gastrodia elata	9.660
	SRR5643515	five period of Gastrodia elata	9.460
	SRR5643524	five period of Gastrodia elata	8.240
	SRR5643525	five period of Gastrodia elata	9.100
	SRR5643528	five period of Gastrodia elata	8.600
	SRR5643658	five period of Gastrodia elata	13.340
	SRR5643659	five period of Gastrodia elata	12.000
	SRR5643660	five period of Gastrodia elata	10.350
	SRR5643661	five period of Gastrodia elata	10.010
	SRR5643662	five period of Gastrodia elata	7.350
	SRR5643663	five period of Gastrodia elata	9.710
	SRR5643664	five period of Gastrodia elata	10.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.440
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.890
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.210
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.430
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	13.210
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.940
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	12.350
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.080
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.120
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.870
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.320
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.320
SRP279888	Gastro	Gastrodia elata tuber	9.87
	Juven	Juvenile tuber	7.58
	Mother_Gastro	Mother tuber of Gastrodia elata	7.22
	Mother_Juven	Mother tuber of Juvenile	4.61