Detail information of GWHGAAEX014605/evm.TU.scaffold_6.185


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|374329029|ref|YP_005079213.1|3.00E-08Beta-Ig-H3/Fasciclin [Pseudovibrio sp. FO-BEG1]
nrgi|695065753|ref|XP_009421475.1|8.47E-75PREDICTED: fasciclin-like arabinogalactan protein 13 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9FFH6|FLA13_ARATH3.00E-54Fasciclin-like arabinogalactan protein 13 (Precursor)
trEMBLtr|M0T970|M0T970_MUSAM2.00E-63Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P22220_001}
TAIRAT5G441301.00E-53FASCICLIN-like arabinogalactan protein 13 precursor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000031203565112037043-
Transcript Sequence

Network for GWHGAAEX014605

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02469.21Fasciclin742071.80E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.740
SRR2545915Juvenile tuber7.970
SRP108465SRR5643513five period of Gastrodia elata64.600
SRR5643514five period of Gastrodia elata91.160
SRR5643515five period of Gastrodia elata68.740
SRR5643524five period of Gastrodia elata45.640
SRR5643525five period of Gastrodia elata207.340
SRR5643528five period of Gastrodia elata148.650
SRR5643658five period of Gastrodia elata415.450
SRR5643659five period of Gastrodia elata21.010
SRR5643660five period of Gastrodia elata6.660
SRR5643661five period of Gastrodia elata12.670
SRR5643662five period of Gastrodia elata8.850
SRR5643663five period of Gastrodia elata12.290
SRR5643664five period of Gastrodia elata5.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_183.450
SRR6049655Rhizomagastrodiae_C368-T10_good_1107.150
SRR6049656Rhizomagastrodiae_C368-T07_good_183.720
SRR6049657Rhizomagastrodiae_C368-T07_good_155.390
SRR6049658Rhizomagastrodiae_C368-T04_good_130.720
SRR6049659Rhizomagastrodiae_C368-T04_good_118.810
SRR6049660Rhizomagastrodiae_C368-T01_good_127.550
SRR6049661Rhizomagastrodiae_C368-T04_good_151.800
SRR6049662Rhizomagastrodiae_C368-T01_good_187.580
SRR6049663Rhizomagastrodiae_C368-T01_good_121.220
SRR6049664Rhizomagastrodiae_C368-T10_good_1107.380
SRR6049665Rhizomagastrodiae_C368-T10_good_1107.380
SRP279888GastroGastrodia elata tuber 7.12
JuvenJuvenile tuber2.55
Mother_GastroMother tuber of Gastrodia elata 2.77
Mother_JuvenMother tuber of Juvenile 1.81