Gene detail

Detail information of GWHGAAEX014608/evm.TU.scaffold_6.191

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|720037277\|ref\|XP_010267620.1\|	1.22E-137	PREDICTED: uncharacterized protein At4g10930-like isoform X2 [Nelumbo nucifera]
Swissprot	tr\|Q8L7I1\|Y4193_ARATH	3.00E-84	Uncharacterized protein At4g10930
trEMBL	tr\|M0SJH6\|M0SJH6_MUSAM	5.00E-135	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P31620_001}
trEMBL	tr\|M0SJH6\|M0SJH6_MUSAM	1.00E-81	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P31620_001}
TAIR	AT4G10930	4.00E-57	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000003	12344230	12449128	-

Transcript Sequence
>GWHTAAEX014608 ATCAAATTCACAATGCTGAGGTGAGCGACGAGTGGATGTTGCTTTGACCGAGGGCAAGGACTGTCGGTGGATAGTTGGTGTCGAGAAAAGCTAAGTTCTATCTTTGTCATTTTAGGGTAGAGGAGAGATTGTCATCGGCGTATTAGGGCAGAGGAGAGAATGCCATCGTCGTTTTAGGGTAGAGAAGAGAACACTTTCGTTCACCTCGGGAGTCGTCTTCGTCTTCGTTCGTCATGGGATTTATCTTCGTCTTCGTTAATCATAGAAATGCAGGAGAAAGAGAAAACGGGCGGGATCAAATTGCGGCGGAGGAAAGGAATGCGATGTCGTCCGAAATTGATGGATATTAGAATGCCATCCTCGCAGAATCCGCTCCATCCTCTCTCTCTGCATTTTGCTGCAATAGATCGCTGCGGGAAGGTTCTCTCCGCATTCCACAGCAAGAGATCGCTGCTGCAGAAAGGTTCACGAGAGTCAAATCTCTCCGCCGCGCACGATCGATCTTCTTCTTCTGCGAGCACGATTTTTTCCGAATCTCGATCGAGGGAAGGCTTTCTGGTGTTGCAGATACATTAGGGTCGAAGACAACAGAGCATGGACATAAGGTGGGCAAATGATGACAAAACTGATGCTTTATGCATTGAAGATGAAGATTGCAATGTTGATTTTTTGTTTGAACAGGAGAGATGTGGAATATGTATTGACGTTGTTATTGACAGAGGGGTACTTGATTGTTGTGAGCATTGGTTTTGTTTTGCATGCATCGATAACTGGGCTGCCATCACAAATCTCTGTCCAATTTGCAAAAATGAGTTTCAACGTATTACATGCCTCCCGGTGTATGATACCATTGGAAGTACCAGCTTGGACGAGCATCCTATTTCCAGGGGAGAGGATTGGTCTCTTCAGGAGAAAAACAACACACTTTCATTTCCATCATACTACATCAGTGAAGATGCAGTAAAATGTTTGGAGAATGATGGTTGCAAGATGCGAGATGCAATGCAAGCAGCTGGAGATGATTTGAGTTTTGATACATCAATTGCTTGCGATTCATGTGATATATGGTATCATGCTTACTGTGTTGAATTTAATCCAGAATTTACATATGAAAGTTCATGGTTGTGCCCGAGGTGCGTTGATAATGAAGTGCTGCATAAGTCAGGAACAGTTGCATTGCAAAGCATTTTGAAATGTCCTGCTCCACTAACTTCTGAAATAGGATGGACAGTAGATCCCGCTCTCTCTGGAAAAATATCTGTTTCTGTTGCTGATGCTGGTGAGACTGCTGTTGTTGTTTCAATGATTGATGGGGATCAAAAGAGAGATTATGAGAGACGTTCTTTTGATAGTCTTGATTCCACCTTGGATATTGGGTTAGCAAATTCTTTATTGTGTTCAGACATTGAAAATTCAGGAACAGATTTACAACTGAAGGATAGTAGTAGCATTCAATTGTCGCAAAATAGCTTGTTTGTCAGTGACTATAAAGCGCACCATACCGATGTATCAGAAGTTGATAGCCGTTCTGATTTAATTTTTGATGTTGCATCACCCGAAATCATTGATTTTCAGGCTCGTAATCACTTGAAGGAAACGATGGTATCATCATATTCTCTTGATGCTGCTGTGATAACGCCAAGAATTGATACACATTCAGAGCCAACAACATTGCATGAAGTGCCATTTGCGGTATGTTATTCTGAAGCAAATGATAAAAAGATCATCAATGCCCAAGAAACATCTAATTCAGTATATTGTGATGGCTATATGGATACATTTTCTGTGGCTTGTGGCTCATTTGTAGCTAAGGATGAACGAGACAGCAAATCTAGTAGCATTATTGATACTTGCTTACTTGCTTCCTCTTCTTCCCTTGAGGCTGCTGTGCTGAAGCCAGGGAATGGTTTCCCTGAATTACAATCAGAGCCAACTAGATTGCATGAAGTGCCATTTTCAGTATGTTATTCTGAAGCAAGTGATAAAAAGAATACCATCAATACTCATGAAACATCTGAATCAGCACATTCCGATGGCTATATGGATACGGTTTCTGTGGTTTGTGGCACATTTGTATCTAAAAGTGAACGAAATAACAATTCTAGTGGTGTTGTTGATACCTGCGTACTTGCTTCCTCTTTTTCATCAGATGACAACATGGTGACAAGCTGTAATGAAGAAATTGCAATTGTTTCTTGCCAAAAGAACAGTGAAGCTTGTAACACCACTGCAATAATCAAGATGAACAAGACATGTACAAAAAATGTTAATGATAACGCTAACTGCATTAGGAAAAGGGAATCAGAAGCTGTATATCCTGCGAAGAAGCTAAAATTTGATAGAAAATCTAGAACTTCGACCACAGAAAATCTCTCTGCTTTGCCTATTTTTAAAGACTCACAAGTGTGCTCAAGACAAAATAGAGATGGTAGCTTAAGTTATGCTAGACAAGAGGAGGCTGAGCCCCCAAATATCATGAGTATAGTTCAGGAAAGTGATTGCACCTTCCATGTTATGCCAACAGTAACAAAGAATGCTAATAAATTTGTTGACATAAAAAATAGTGCTTGTGGGTTGAGAGTGAAAAAGATCATGAGAAGAGTTGCAGAGAAAGGAGATTCATCTGTCTTAGCTCAAAAATTAGGGAAGGAGATAAGAGAAGTGTCTCAACAGAAAAACATGAAATGCATTGGAAAGAATGACATTGGTGAAAGGCTTCTGGCAGCTTTCAGAGCTGCATCAGTAAGATCCCAGACTGAATTGAAAAAAAGGTCTGAACATGCACTTGTAGTGGCAAAGAATCCTCTTTTACTGAAAGGAAAGAAACGTGAAAATCTTACCAAAAAGATTTATGGAACTTTCGGTGGAAGGAGACGGCATGCATGGACAAGGGATTTGGAAATCGAGTTCTGGAGGCATCGATGTAGAAAATTGCAACCTGATAAGGTTGAGACGCTACAATCAGTTCTTGAGCTCTTGAAAAAGGCTACAAACCCTCACTGGAATGGATATATGGAAAGAGATTCTCGAGAGGAAAGTGCAGACTCAATCTTGTCTAGGGTATATATAGCTGATGTATCACTTTTCCCCAGAAAAAATGATATAAAGCCTTTGTCAGCGCTGTCAGGAAGTTCTCAGCTTGATAATAATATTCTGAACGAGCAGAGAAGCTCAAGAAATTTGGCAGAGGGACCTTTGAATGATGATAAAATTCAAAATTTTAAAAATTTATCACAACATAATGTTACGTTGTCTAACAATGTAGAAAAAAATATACAAGCCCCGTGCTTCCCTGAAGAAGCTCATAGTTCTGGATCTAACCTGTCTAAAGAAAGTATAGTTACTTCAAAGCAGGATTCTTGTCCATTTGATAAAAGGAAATGGGCACTTGAGGTTCTAGCTAGAAAAACTGCCTTATCAAGCTTGAATGCAAGTAAAGCGCAAGAAGATAATACTTTGTTCAGGGAAAAGTATCCTTTATTAGCACAACTACCATCTGATATGAGACCTGTACTAGCGTCTACTTCCTACAAGAAAGTTTTTGCATCCGTTAGGCAGGCACAACTGTATTGTATCACTGAGCATTATTTGAGGAGTGCAAATCTACCGGTTGTTCGAAGGACTGCAGAGACAGAGTTGGCCCTTGCTGATGCAGTTAATGTTGAGAAAGACATTTTCGAAAGGTCAAATAGCAAGTTAGTTTATGTGAACCTTTGCTCGCAGGCAGTATATCAAATCACTAACAAACCAGAATCTGCTGAGGCAAACGTTTCTGAATCCGCAAATGCTGCTTTAGCTGACACTACAGCTGATGAAAAACTAGAATCAGCTGGTACCGACTTTGATTCAACATCTACTGTTGAGCTATCGTGTAAGGCAAATTCTGACACTAAAGCTGGTGGATGGAGCAGTGTGGAAGAAGCTTTGAAAATGACTGGCCTGTTTTCTGATTCTCCTCCTAGCAGTCCTGACGGTGCTACAAAATATTCCATTGAAGATGCATCTATTCATGAAAATGTCATTGAAAACCTTAATTATGGTGCTCAAAGTGATGTCTTACATGCCTTTGATACAAGAGAAGCTGATGATTGCATGAACGTTGAGGTCAAGCCACCTTTTGATATTTCCAAATCATTGGAGCCGCAAAAAGAAAGGGGGAAGGACAACTCAGAAGAGGTACCAAAGATGCCTTTTTTGGATGATTGTGAAGGTGTCAACGAAGAGCATCAGAAGTGCCAAATGTCTGATAAGGATGCCGAACCGTTGAAGAACCCTCCCATTATAGTTGAGGATGGAAACACGGATTCTTCTTTGAGAGAGAGTTGCTGCATACTGAATGATGGAGCCAAAGTTTCTGTGATACATGATGCCAAGAGCTGCTGCAGTAACAACCATCTTGATGCTGTATCAGCTGAGAAAGAGAACTCTGAAACTCTATCGATTGGGAATTTGCCAAATAATCCCGTCAGTTGCTATCATAATCCCAATGAAGAAATATCTAAATTGGCCAATGACAAGTCGGATCTTGAAACATCAATATCTAAAAAGGTTGAGGCCTACATAAAAGAACACATCCGGCCACTATTTAAGATTGGTGTCATCACAGCAGAGCAGTACCGATGGGCGGTTGGAAAAACGTTAGATAAGGTGATGAAGTTTCATCACAAGGCCAAGAATGCGAACTTTCTTATCCGAGAAGGTGACAAGGTTAAGAAACTCGCCGAACAATATGCCGAAGCCGCGCAAAAGAAAGGATCTTCATGACTTGATTCGATTCGCCTTCTTTCAAAAAGAAGTTCCTTTATAAGAATTTGCACTGGTAGTTGCAAGTGTGATCATAACGCAGTGTGGAAGCCAAAGCATAATTCAACTTCATGCAATTTTCCGGAAATTAGTGAATTGTGTCTTGCCGGATCTTCTATATTATCAATGGATTTATATTTGCAACACTTGGTGGTTTGATATGTGATGAGTTCCGCGTTGTCATTGATTTTGGTTACAAGTCTTTGCTGTCATCCACAGTAATATATCAATGATGGGAAAGATAGACATCATTCCCCTTTGTGTGAGCCAATGCTGAGATTTGTATAGTGAGTGTGATGGAAGATGTGGTATATAAGAGTGTTTTAGGGTTTAGAGTGCTTTGTTGCTTCTTCACTAAAAACTATTTAGGAATGGAAACATATGATCATCTGTGAAGAGGTTGTTGCTTAGAAGACTTGCTTTGCTTGTATATAAAAATATTCCTAATTTTAGGGGAAAAACAATACATAATCTAATATTTCAAATAAAGTAACATCTTTTCACTAATTTTAAATTCTTCTAATTG

Network for GWHGAAEX014608

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13639.5	zf-RING_2	31	71	2.00E-06
PF00628.28	PHD	147	182	7.70E-08

Protein Sequence

>GWHPAAEX014608
MDIRWANDDKTDALCIEDEDCNVDFLFEQERCGICIDVVIDRGVLDCCEHWFCFACIDNWAAITNLCPICKNEFQRITCLPVYDTIGSTSLDEHPISRGEDWSLQEKNNTLSFPSYYISEDAVKCLENDGCKMRDAMQAAGDDLSFDTSIACDSCDIWYHAYCVEFNPEFTYESSWLCPRCVDNEVLHKSGTVALQSILKCPAPLTSEIGWTVDPALSGKISVSVADAGETAVVVSMIDGDQKRDYERRSFDSLDSTLDIGLANSLLCSDIENSGTDLQLKDSSSIQLSQNSLFVSDYKAHHTDVSEVDSRSDLIFDVASPEIIDFQARNHLKETMVSSYSLDAAVITPRIDTHSEPTTLHEVPFAVCYSEANDKKIINAQETSNSVYCDGYMDTFSVACGSFVAKDERDSKSSSIIDTCLLASSSSLEAAVLKPGNGFPELQSEPTRLHEVPFSVCYSEASDKKNTINTHETSESAHSDGYMDTVSVVCGTFVSKSERNNNSSGVVDTCVLASSFSSDDNMVTSCNEEIAIVSCQKNSEACNTTAIIKMNKTCTKNVNDNANCIRKRESEAVYPAKKLKFDRKSRTSTTENLSALPIFKDSQVCSRQNRDGSLSYARQEEAEPPNIMSIVQESDCTFHVMPTVTKNANKFVDIKNSACGLRVKKIMRRVAEKGDSSVLAQKLGKEIREVSQQKNMKCIGKNDIGERLLAAFRAASVRSQTELKKRSEHALVVAKNPLLLKGKKRENLTKKIYGTFGGRRRHAWTRDLEIEFWRHRCRKLQPDKVETLQSVLELLKKATNPHWNGYMERDSREESADSILSRVYIADVSLFPRKNDIKPLSALSGSSQLDNNILNEQRSSRNLAEGPLNDDKIQNFKNLSQHNVTLSNNVEKNIQAPCFPEEAHSSGSNLSKESIVTSKQDSCPFDKRKWALEVLARKTALSSLNASKAQEDNTLFREKYPLLAQLPSDMRPVLASTSYKKVFASVRQAQLYCITEHYLRSANLPVVRRTAETELALADAVNVEKDIFERSNSKLVYVNLCSQAVYQITNKPESAEANVSESANAALADTTADEKLESAGTDFDSTSTVELSCKANSDTKAGGWSSVEEALKMTGLFSDSPPSSPDGATKYSIEDASIHENVIENLNYGAQSDVLHAFDTREADDCMNVEVKPPFDISKSLEPQKERGKDNSEEVPKMPFLDDCEGVNEEHQKCQMSDKDAEPLKNPPIIVEDGNTDSSLRESCCILNDGAKVSVIHDAKSCCSNNHLDAVSAEKENSETLSIGNLPNNPVSCYHNPNEEISKLANDKSDLETSISKKVEAYIKEHIRPLFKIGVITAEQYRWAVGKTLDKVMKFHHKAKNANFLIREGDKVKKLAEQYAEAAQKKGSS

Gene family

Gene family	subfamily
Transcription Factors Family	PHD
Ubiquitin Family	RING

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0046872	Molecular Function	metal ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	56.990
SRP064423	SRR2545915	Juvenile tuber	45.770
SRP108465	SRR5643513	five period of Gastrodia elata	14.270
	SRR5643514	five period of Gastrodia elata	15.060
	SRR5643515	five period of Gastrodia elata	15.590
	SRR5643524	five period of Gastrodia elata	15.830
	SRR5643525	five period of Gastrodia elata	13.640
	SRR5643528	five period of Gastrodia elata	11.160
	SRR5643658	five period of Gastrodia elata	17.840
	SRR5643659	five period of Gastrodia elata	15.300
	SRR5643660	five period of Gastrodia elata	15.590
	SRR5643661	five period of Gastrodia elata	14.870
	SRR5643662	five period of Gastrodia elata	9.700
	SRR5643663	five period of Gastrodia elata	12.230
	SRR5643664	five period of Gastrodia elata	10.800
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.450
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	14.490
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	16.140
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	19.440
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	19.870
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	24.160
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	19.580
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	20.910
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	15.650
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.110
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.960
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.960
SRP279888	Gastro	Gastrodia elata tuber	18.81
	Juven	Juvenile tuber	15.73
	Mother_Gastro	Mother tuber of Gastrodia elata	12.97
	Mother_Juven	Mother tuber of Juvenile	14.73