Detail information of GWHGAAEX014609/evm.TU.scaffold_6.196


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|593689022|ref|XP_007145130.1|2.33E-148hypothetical protein PHAVU_007G212600g [Phaseolus vulgaris]
Swissprottr|Q9SYJ2|GPAT3_ARATH3.00E-128Probable glycerol-3-phosphate acyltransferase 3
trEMBLtr|V7BGW0|V7BGW0_PHAVU9.00E-149Uncharacterized protein {ECO:0000313|EMBL:ESW17124.1}
TAIRAT4G019501.00E-127glycerol-3-phosphate acyltransferase 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000031253063712535604-
Transcript Sequence

Network for GWHGAAEX014609

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01553.20Acyltransferase2793749.10E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13508GPAT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Glycerolipid metabolismmap00561
Glycerophospholipid metabolismmap00564

Gene Ontology

GO term OntologyName
GO:0016746Molecular Functiontransferase activity, transferring acyl groups

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.240
SRR2545915Juvenile tuber13.240
SRP108465SRR5643513five period of Gastrodia elata19.550
SRR5643514five period of Gastrodia elata12.070
SRR5643515five period of Gastrodia elata17.900
SRR5643524five period of Gastrodia elata12.300
SRR5643525five period of Gastrodia elata7.780
SRR5643528five period of Gastrodia elata4.910
SRR5643658five period of Gastrodia elata5.940
SRR5643659five period of Gastrodia elata23.770
SRR5643660five period of Gastrodia elata15.840
SRR5643661five period of Gastrodia elata30.340
SRR5643662five period of Gastrodia elata16.750
SRR5643663five period of Gastrodia elata21.300
SRR5643664five period of Gastrodia elata20.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.580
SRR6049655Rhizomagastrodiae_C368-T10_good_119.300
SRR6049656Rhizomagastrodiae_C368-T07_good_118.560
SRR6049657Rhizomagastrodiae_C368-T07_good_118.290
SRR6049658Rhizomagastrodiae_C368-T04_good_121.220
SRR6049659Rhizomagastrodiae_C368-T04_good_122.740
SRR6049660Rhizomagastrodiae_C368-T01_good_122.780
SRR6049661Rhizomagastrodiae_C368-T04_good_125.070
SRR6049662Rhizomagastrodiae_C368-T01_good_124.410
SRR6049663Rhizomagastrodiae_C368-T01_good_122.830
SRR6049664Rhizomagastrodiae_C368-T10_good_114.870
SRR6049665Rhizomagastrodiae_C368-T10_good_114.870
SRP279888GastroGastrodia elata tuber 14.63
JuvenJuvenile tuber15.58
Mother_GastroMother tuber of Gastrodia elata 9.83
Mother_JuvenMother tuber of Juvenile 18.87