Gene detail

Detail information of GWHGAAEX014610/evm.TU.scaffold_6.195

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1339	5.00E-161	Aspartyl protease
nr	gi\|695014683\|ref\|XP_009394177.1\|	0	PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9LS40\|ASPG1_ARATH	2.00E-116	Protein ASPARTIC PROTEASE IN GUARD CELL 1 (Precursor)
trEMBL	tr\|K3XH10\|K3XH10_SETIT	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Si001181m}
TAIR	AT1G01300	5.00E-161	Eukaryotic aspartyl protease family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000003	12531009	12532454	+

Transcript Sequence
>GWHTAAEX014610 ATGGCGGAGGCGTCATCGGCCAGAAAACCCCAAAATCCAGTTCTCTTCCTTCTTCTCCTCCCCTTCATTCTCACATCCGGCACAGATTTGCAACCCTTAGTCCTAAACCCTCTTCGCATTCCCCCTCCTCTACGTCCCGACGACGATCCCCTTTCCTCGACCGCCGACACAGAATCCCTAACCCTAGCCCTAACTCTCGCTCATCGCGATTCCCTCTTCTACGGCAACCGCACCGCCGATCAAGCCTTCCATCTCCGCCTCCGCCGCGACGCCGCGCGAGTCTCCCAGATCGAGCAAACCCTAGCCTCGTCCTCGAACCAAACCCGCCAAGACCGAAGACGAAGCTTCAGCAGCGCCGTGATCTCCGGGCTGGCTCATGGCAGCGGCGAGTACTTCGCCCGCATCGGAATCGGAACTCCGGCGAGGCCGGCCTTCATGGTCCTGGACACCGGCAGCGATATCGTCTGGCTTCAGTGCTCCCCCTGCCGCAGGTGCTACCAGCAGTCCGACCCCGTCTTCGACCCCCGCCTCTCCAGCTCCTTCGCCGCCGTCCCCTGCGGCGCCAACCTCTGCCGCCATCTCGATGTCTCAGGCTGCGATTCGCGCCGCCTCTCCTGCCTCTACCAGGTCTCCTATGGCGACGGGTCCCTCACCACCGGCGAGTTCGCCACCGAGACCCTCACGTTCCGTGGCAACGCTCGCGTCCCCCGCATCGCCCTGGGCTGCGGCCATGACAACGAGGGCCTCTTTGTCGCCGCCGCCGGCCTTCTCGGCCTCGGCCGTGGCCGCCTCTCGTTCCCTTCACAGGCAGGCCGCAGATTCGGCCGCCAATTCTCATATTGCCTCGTCGACCGTGCGGCCAGTTCTCGCCTCCGATCCTCGTCCGTGGTGTTCGGCGCTTCGGCGCCGCCCACTGCTCGATTCACGCCCATGGTGCGGAATCCGAAGATGGGGTCGTTCTACTACGTGGACGTGGCGGAGCTGAGCGTTGGCGGGAGGAGAATCGGCGGAGCGGCGAACGCGGAGCTGAGGTTGGATCCGGCGACGGGGAGGGGAGGGGTGATCGTGGATTCGGGGACGTCGGTCACGCGCCTGGCCAGAGGCGCGTACGCCGCCTTGCGAGACACTTTCAAGGCCGGGGCGGCCGCCGAGTCGGGAATGTCGGCTCTGCCTGCAGGCTACTCCCTCTTCGACACGTGCTACGATCTCACAGGCAGGGAGGAGGTGAGGGTGCCTACGGTGGTGCTGCATCTCGCCGGAGGATCAGAGATGGCGCTGCCGGCGGAGAATTACCTGATTCCGGTCGACGGGAAGGGGACCTTCTGTTTCGCCTTCGCCGGGACGGACAGCGGCGTCTCTATCATAGGGAACATACAGCAGCAGGGTTTCAGGGTTGTGTTCGATGCGGACGGTGGACGGGTCGGATTCCTTCCGAGAGGTTGCTAG

Network for GWHGAAEX014610

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14543.5	TAXi_N	131	299	5.40E-54
PF14541.5	TAXi_C	321	476	8.10E-34

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004190	Molecular Function	aspartic-type endopeptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	53.890
	SRR5643514	five period of Gastrodia elata	36.270
	SRR5643515	five period of Gastrodia elata	46.620
	SRR5643524	five period of Gastrodia elata	32.850
	SRR5643525	five period of Gastrodia elata	0.000
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	17.540
	SRR5643660	five period of Gastrodia elata	11.970
	SRR5643661	five period of Gastrodia elata	33.700
	SRR5643662	five period of Gastrodia elata	19.570
	SRR5643663	five period of Gastrodia elata	31.900
	SRR5643664	five period of Gastrodia elata	3.050
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	30.570
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	30.250
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	36.230
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	27.190
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.040
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	21.230
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	27.860
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	72.930
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	32.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	45.550
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	45.550
SRP279888	Gastro	Gastrodia elata tuber	6.58
	Juven	Juvenile tuber	8.13
	Mother_Gastro	Mother tuber of Gastrodia elata	1.90
	Mother_Juven	Mother tuber of Juvenile	0.00