Detail information of GWHGAAEX014627/evm.TU.scaffold_60.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|158522335|ref|YP_001530205.1|3.00E-103NAD-dependent epimerase/dehydratase [Desulfococcus oleovorans Hxd3]
KOGKOG13710UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase
nrgi|743883816|ref|XP_010909513.1|0PREDICTED: LOW QUALITY PROTEIN: UDP-glucuronate 4-epimerase 3-like [Elaeis guineensis]
Swissprottr|O81312|GAE3_ARATH0UDP-glucuronate 4-epimerase 3
trEMBLtr|A0A061E1X2|A0A061E1X2_THECC0UDP-D-glucuronate 4-epimerase 3 {ECO:0000313|EMBL:EOX96243.1}
TAIRAT4G001100UDP-D-glucuronate 4-epimerase 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000061596939598279-
Transcript Sequence

Network for GWHGAAEX014627

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16363.4GDP_Man_Dehyd1094282.20E-47
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K08679E5.1.3.6 Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.870
SRR2545915Juvenile tuber7.510
SRP108465SRR5643513five period of Gastrodia elata20.090
SRR5643514five period of Gastrodia elata19.230
SRR5643515five period of Gastrodia elata20.650
SRR5643524five period of Gastrodia elata17.110
SRR5643525five period of Gastrodia elata31.900
SRR5643528five period of Gastrodia elata35.200
SRR5643658five period of Gastrodia elata35.510
SRR5643659five period of Gastrodia elata22.820
SRR5643660five period of Gastrodia elata18.000
SRR5643661five period of Gastrodia elata22.470
SRR5643662five period of Gastrodia elata19.790
SRR5643663five period of Gastrodia elata20.560
SRR5643664five period of Gastrodia elata21.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.870
SRR6049655Rhizomagastrodiae_C368-T10_good_125.000
SRR6049656Rhizomagastrodiae_C368-T07_good_128.780
SRR6049657Rhizomagastrodiae_C368-T07_good_121.690
SRR6049658Rhizomagastrodiae_C368-T04_good_119.170
SRR6049659Rhizomagastrodiae_C368-T04_good_117.130
SRR6049660Rhizomagastrodiae_C368-T01_good_124.430
SRR6049661Rhizomagastrodiae_C368-T04_good_127.730
SRR6049662Rhizomagastrodiae_C368-T01_good_128.760
SRR6049663Rhizomagastrodiae_C368-T01_good_125.960
SRR6049664Rhizomagastrodiae_C368-T10_good_129.460
SRR6049665Rhizomagastrodiae_C368-T10_good_129.460
SRP279888GastroGastrodia elata tuber 19.18
JuvenJuvenile tuber17.29
Mother_GastroMother tuber of Gastrodia elata 32.79
Mother_JuvenMother tuber of Juvenile 15.01