Detail information of GWHGAAEX014635/evm.TU.scaffold_60.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695000380|ref|XP_009411421.1|5.59E-56PREDICTED: protein IQ-DOMAIN 32-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9FXI5|IQD32_ARATH1.00E-35Protein IQ-DOMAIN 32
trEMBLtr|K4BVK0|K4BVK0_SOLLC5.00E-47Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc04g081210.2.1}
TAIRAT1G198705.00E-35IQ-domain 32

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000061986337994450+
Transcript Sequence

Network for GWHGAAEX014635

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00612.26IQ991160.15
PF00612.26IQ1201370.0099
PF13178.5DUF40055266044.10E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms39.300
SRR2545915Juvenile tuber29.200
SRP108465SRR5643513five period of Gastrodia elata8.420
SRR5643514five period of Gastrodia elata7.510
SRR5643515five period of Gastrodia elata10.530
SRR5643524five period of Gastrodia elata9.800
SRR5643525five period of Gastrodia elata17.050
SRR5643528five period of Gastrodia elata17.610
SRR5643658five period of Gastrodia elata18.090
SRR5643659five period of Gastrodia elata4.960
SRR5643660five period of Gastrodia elata4.210
SRR5643661five period of Gastrodia elata5.420
SRR5643662five period of Gastrodia elata5.170
SRR5643663five period of Gastrodia elata4.250
SRR5643664five period of Gastrodia elata6.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.580
SRR6049655Rhizomagastrodiae_C368-T10_good_110.450
SRR6049656Rhizomagastrodiae_C368-T07_good_18.710
SRR6049657Rhizomagastrodiae_C368-T07_good_18.930
SRR6049658Rhizomagastrodiae_C368-T04_good_18.980
SRR6049659Rhizomagastrodiae_C368-T04_good_19.960
SRR6049660Rhizomagastrodiae_C368-T01_good_18.590
SRR6049661Rhizomagastrodiae_C368-T04_good_18.840
SRR6049662Rhizomagastrodiae_C368-T01_good_16.640
SRR6049663Rhizomagastrodiae_C368-T01_good_16.940
SRR6049664Rhizomagastrodiae_C368-T10_good_17.600
SRR6049665Rhizomagastrodiae_C368-T10_good_17.600
SRP279888GastroGastrodia elata tuber 7.49
JuvenJuvenile tuber7.68
Mother_GastroMother tuber of Gastrodia elata 27.52
Mother_JuvenMother tuber of Juvenile 41.51