Detail information of GWHGAAEX014644/evm.TU.scaffold_60.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG41466.00E-33Ubiquitin-like protein
nrgi|695041457|ref|XP_009408336.1|4.26E-48PREDICTED: LOW QUALITY PROTEIN: ubiquitin-related modifier 1 homolog [Musa acuminata subsp. malaccensis]
Swissprottr|B3H7G2|URM12_ARATH3.00E-46Ubiquitin-related modifier 1 homolog 2 {ECO:0000255|HAMAP-Rule:MF_03048}
trEMBLtr|B9IC87|B9IC87_POPTR1.00E-47Ubiquitin-related modifier 1 homolog {ECO:0000256|HAMAP-Rule:MF_03048}
TAIRHS135698706.00E-33Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006113403461346244-
Transcript Sequence

Network for GWHGAAEX014644

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09138.10Urm13998.70E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12161URM1 Sulfur relay system map04122

Gene Ontology

GO term OntologyName
GO:0034227Biological ProcesstRNA thio-modification
GO:0005737Cellular Componentcytoplasm

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.990
SRR2545915Juvenile tuber10.690
SRP108465SRR5643513five period of Gastrodia elata23.900
SRR5643514five period of Gastrodia elata31.690
SRR5643515five period of Gastrodia elata27.900
SRR5643524five period of Gastrodia elata31.870
SRR5643525five period of Gastrodia elata46.140
SRR5643528five period of Gastrodia elata36.290
SRR5643658five period of Gastrodia elata42.260
SRR5643659five period of Gastrodia elata18.840
SRR5643660five period of Gastrodia elata17.120
SRR5643661five period of Gastrodia elata17.670
SRR5643662five period of Gastrodia elata12.940
SRR5643663five period of Gastrodia elata15.270
SRR5643664five period of Gastrodia elata11.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.190
SRR6049655Rhizomagastrodiae_C368-T10_good_16.930
SRR6049656Rhizomagastrodiae_C368-T07_good_111.500
SRR6049657Rhizomagastrodiae_C368-T07_good_116.440
SRR6049658Rhizomagastrodiae_C368-T04_good_115.800
SRR6049659Rhizomagastrodiae_C368-T04_good_118.790
SRR6049660Rhizomagastrodiae_C368-T01_good_114.380
SRR6049661Rhizomagastrodiae_C368-T04_good_112.330
SRR6049662Rhizomagastrodiae_C368-T01_good_112.240
SRR6049663Rhizomagastrodiae_C368-T01_good_112.350
SRR6049664Rhizomagastrodiae_C368-T10_good_115.560
SRR6049665Rhizomagastrodiae_C368-T10_good_115.560
SRP279888GastroGastrodia elata tuber 16.87
JuvenJuvenile tuber30.97
Mother_GastroMother tuber of Gastrodia elata 31.25
Mother_JuvenMother tuber of Juvenile 38.79