Gene detail

Detail information of GWHGAAEX014646/evm.TU.scaffold_60.45

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|71277763\|ref\|YP_270010.1\|	2.00E-97	serine protease [Colwellia psychrerythraea 34H]
nr	gi\|743777518\|ref\|XP_010919194.1\|	0	PREDICTED: subtilisin-like protease isoform X1 [Elaeis guineensis]
Swissprot	tr\|O65351\|SUBL_ARATH	0	Subtilisin-like protease (Precursor)
trEMBL	tr\|B9IC48\|B9IC48_POPTR	0	Subtilase family protein {ECO:0000313\|EMBL:EEE98401.2}
TAIR	AT1G01900	0	subtilase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000061	1429451	1431763	-

Transcript Sequence
>GWHTAAEX014646 ATGATTCCGATTCTGTTTCTGTCACTTGTCCTGGCAAAAGCGGGAGGGCTGTCAAACCCCAACTCCACTGCAAAAACCTATATAATTCACATGGATTCAGCCAAGGTCTCGTCCATGGAACACTCTCTTGGCGGCAGCAGGAGATGGCACGAATTCATTTTCGACTCATTGCATGAAGAACAAGAAGACGAGGAGCCGGAACTGCTTTACGTCTACAGCACCGCCATCTCTGGTTTCGCTGCAAAGCTCACCCCGCGACAGGTGGCCTCCATCAAAGAGCTCGACGGCTTCATCTCCGCTCATCCCGACAAACTCCTCAGCCTCCACACAACCCGCTCCCCCGGTTTCCTCGGCCTGAAACCGGACTCCGGCCTCTGGAGCACAGCGAACTCCTTTCCCGACGTCATAATCGGCTTTATTGACACCGGCATATGGCCAGAGCACGCCAGCTTTCGCGATTCGGATTTGCCACCGATTCCTCCCCGGTGGAAAGGCACGTGCGAGGGAAGCCCGCGCTTCCCCTGCAACAGGAAGATCATTGGCGCGAGGGCCTTCTGGAAAGGGTACGACGCCATCATAGGAGATCGATCCGACGGCCGCAGCACCAAGACGTTCCAATCCGCCAGGGATTGGTACGGCCACGGCACGCACACGGCCTCGATCGCTGCCGGCAGCAGGGTTTCCCCCGCCAGCCTCTTCGGCCACGCAAACGGCAGCGCCAGCGGGATGCACAGCGCTGCCAGGATCGCGGCTTACAAGGTCTGCTGGTCTGACAGCTGCGCCGAGTCCGACGTAACTGCGGCCATCGATCAGGCTGTTGACGACGGCATCGATGTCCTGTCCATTTCGCTCGGAGCAGGCGACAGCACTTTCGCTTCTCCCTCGTTGGACATGGACGCCGTCGCTGTTGCCACGTTCGGGGCCGTGCAAAAGGGAGTGTTCGTAGCCTGCTCGGGAGGGAACTCTGGCCCGAAGGAGTCTACCGTCGTCAATAGTGCGCCGTGGGTCATGACCGTCGCTGCCAGCTACATCGACCGGAGCTTTCCGGCCCTGGTGAAGCTCGGAGACGACCAGAGATTTGTCGGCGCGTCCATTCACACGAGGATGAAGAATCGCACTGGAGATCTTCCGATCGCCTACGATCCCGGCAGCGCCTCCCGGTACTGCTTGCCCGGCACCCTTGTTTCGGCTAAAGGATGCCTCGTTGCATGTGATTCGGACAGCAATGACCCGTCAATCAAGGAGGAGGAAGTGAACCGGGCAGGAGGAGCCGGAATGATTCTGCTGAACCGGGAGGATCAGGGGGAGGAGCTCCTCGCCGGAGCCCACGTCATCCCCGTCTCAACCCTTGGAGCGGCCGCCGCGACGGCGATCAAAGGCTACTGCAGATCATCGATTCGCCCGACGGCTTCCATTTATTTCATGGGGACAGCTTACGGCACGACCGCTCCGATGATCGCAGCGTTCTCGTCCCGCGGGCCGAGCCTGTCCATGCCAAGCGTCGTAAAGCCCGACGTGACAGCCCCCGGCGCCAATATACTGGGGGCGTGGAGCCCTTCCGCAAGCCCTTCGTCCGTGATGAGCGATAGAAGGAAGGTCCCCTTCAATGTCGATTCGGGCACCTCCATGTCCTGCCCGCACGTCAGCGGGCTCGCCGCCCTCCTCAAATCCATCCACTCGGATTGGTCCCCGGCGGTGATCAAGTCCGCGTTGATGACCACCGCCTATGCTCGGGATAACCGGAATTCGTCCATTGTCGATGTCAGCAATGGGCTTCCGGCGACACCCTTCGCATTCGGGTCGGGACACGTCGATCCGGAGAGAGCGGCACACCCGGGCCTTGTGTACGATATCGATCCGAATGACTACTTGTGTTTCATGTGTGTCACCATGGGCTACACTTCGTCGCAGGTGTCGGTGGTGGCAAGGAAGCAGTATAGTTGTGCCAATTGTCGCGGGGATTCGAGTGTCCGTTGGGGCTTGAATTACCCGACGTTTTCTGTGTTGTTTCACAGAGGGAATCGAAATCAGACGGTGGTTCAGTGGAGGACAGCGACCAACGTTGGTCAGGGTCGGTGTGACTACAAGGCGAAGGTGAGTGAGCCGGACGGAGTCGCTGTGGCCGTCCATCCGAGCGTCCTGGCATTTACTAGAACCGGAGAGAAGTTGGATTATAATGTAACGTTTGTCTCCATTGCTGCTGGCCGGAAGGCGGTTGGCTACTCTTTTGGGGAGTTGGCTTGGGTTTGTGGTAATTTCTCTGTCAGAAGTCCGGTGGCAGTTACTTGGGGGTATCGTCGTTGGCCGATTTAA

Network for GWHGAAEX014646

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05922.15	Inhibitor_I9	26	109	7.20E-10
PF00082.21	Peptidase_S8	134	581	1.00E-47

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004252	Molecular Function	serine-type endopeptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.150
SRP064423	SRR2545915	Juvenile tuber	2.900
SRP108465	SRR5643513	five period of Gastrodia elata	6.300
	SRR5643514	five period of Gastrodia elata	6.020
	SRR5643515	five period of Gastrodia elata	3.870
	SRR5643524	five period of Gastrodia elata	4.340
	SRR5643525	five period of Gastrodia elata	4.450
	SRR5643528	five period of Gastrodia elata	4.220
	SRR5643658	five period of Gastrodia elata	3.840
	SRR5643659	five period of Gastrodia elata	5.210
	SRR5643660	five period of Gastrodia elata	5.640
	SRR5643661	five period of Gastrodia elata	6.140
	SRR5643662	five period of Gastrodia elata	5.290
	SRR5643663	five period of Gastrodia elata	4.960
	SRR5643664	five period of Gastrodia elata	6.260
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.530
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.060
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.970
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.870
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	10.070
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.330
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.520
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	8.500
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.630
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.140
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.120
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.120
SRP279888	Gastro	Gastrodia elata tuber	8.36
	Juven	Juvenile tuber	11.87
	Mother_Gastro	Mother tuber of Gastrodia elata	6.09
	Mother_Juven	Mother tuber of Juvenile	5.56