Detail information of GWHGAAEX014653/evm.TU.scaffold_60.57


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|661878479|emb|CDP17781.1|8.03E-82unnamed protein product [Coffea canephora]
Swissprottr|O81323|LBD30_ARATH2.00E-65LOB domain-containing protein 30
trEMBLtr|A0A068VAN4|A0A068VAN4_COFCA3.00E-82Coffea canephora
TAIRAT4G002206.00E-65Lateral organ boundaries (LOB) domain family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006118900051892034+
Transcript Sequence

Network for GWHGAAEX014653

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.13LOB271256.80E-38
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.660
SRR2545915Juvenile tuber2.810
SRP108465SRR5643513five period of Gastrodia elata0.960
SRR5643514five period of Gastrodia elata2.310
SRR5643515five period of Gastrodia elata1.470
SRR5643524five period of Gastrodia elata2.160
SRR5643525five period of Gastrodia elata6.030
SRR5643528five period of Gastrodia elata7.840
SRR5643658five period of Gastrodia elata5.280
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.120
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.390
SRR6049655Rhizomagastrodiae_C368-T10_good_19.720
SRR6049656Rhizomagastrodiae_C368-T07_good_15.560
SRR6049657Rhizomagastrodiae_C368-T07_good_13.670
SRR6049658Rhizomagastrodiae_C368-T04_good_12.790
SRR6049659Rhizomagastrodiae_C368-T04_good_13.160
SRR6049660Rhizomagastrodiae_C368-T01_good_16.440
SRR6049661Rhizomagastrodiae_C368-T04_good_16.300
SRR6049662Rhizomagastrodiae_C368-T01_good_17.440
SRR6049663Rhizomagastrodiae_C368-T01_good_15.070
SRR6049664Rhizomagastrodiae_C368-T10_good_12.990
SRR6049665Rhizomagastrodiae_C368-T10_good_12.990
SRP279888GastroGastrodia elata tuber 0.02
JuvenJuvenile tuber0.02
Mother_GastroMother tuber of Gastrodia elata 160.58
Mother_JuvenMother tuber of Juvenile 9.39