Detail information of GWHGAAEX014658/evm.TU.scaffold_60.64


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743826920|ref|XP_010933441.1|1.94E-32PREDICTED: B3 domain-containing protein Os04g0386900-like isoform X1 [Elaeis guineensis]
Swissprottr|Q7XLP4|Y4869_ORYSJ1.00E-29B3 domain-containing protein Os04g0386900
trEMBLtr|B6SN49|B6SN49_MAIZE1.00E-30Uncharacterized protein {ECO:0000313|EMBL:AFW58061.1, ECO:0000313|EnsemblPlants:GRMZM2G126194_P01}
TAIRAT1G494807.00E-07related to vernalization1 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006119678011999286+
Transcript Sequence

Network for GWHGAAEX014658

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02362.20B31492413.40E-16
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyB3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.520
SRR2545915Juvenile tuber14.350
SRP108465SRR5643513five period of Gastrodia elata7.120
SRR5643514five period of Gastrodia elata7.890
SRR5643515five period of Gastrodia elata8.840
SRR5643524five period of Gastrodia elata7.390
SRR5643525five period of Gastrodia elata8.090
SRR5643528five period of Gastrodia elata7.850
SRR5643658five period of Gastrodia elata8.870
SRR5643659five period of Gastrodia elata8.630
SRR5643660five period of Gastrodia elata8.340
SRR5643661five period of Gastrodia elata7.450
SRR5643662five period of Gastrodia elata10.300
SRR5643663five period of Gastrodia elata9.100
SRR5643664five period of Gastrodia elata12.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.370
SRR6049655Rhizomagastrodiae_C368-T10_good_17.130
SRR6049656Rhizomagastrodiae_C368-T07_good_17.370
SRR6049657Rhizomagastrodiae_C368-T07_good_18.180
SRR6049658Rhizomagastrodiae_C368-T04_good_110.380
SRR6049659Rhizomagastrodiae_C368-T04_good_19.100
SRR6049660Rhizomagastrodiae_C368-T01_good_17.830
SRR6049661Rhizomagastrodiae_C368-T04_good_111.630
SRR6049662Rhizomagastrodiae_C368-T01_good_18.730
SRR6049663Rhizomagastrodiae_C368-T01_good_110.620
SRR6049664Rhizomagastrodiae_C368-T10_good_19.790
SRR6049665Rhizomagastrodiae_C368-T10_good_19.790
SRP279888GastroGastrodia elata tuber 17.30
JuvenJuvenile tuber12.31
Mother_GastroMother tuber of Gastrodia elata 13.11
Mother_JuvenMother tuber of Juvenile 10.49