Detail information of GWHGAAEX014663/evm.TU.scaffold_60.81
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|336117644|ref|YP_004572412.1| | 2.00E-30 | oxidoreductase [Microlunatus phosphovorus NM-1] |
| KOG | KOG0143 | 6.00E-155 | Iron/ascorbate family oxidoreductases |
| nr | gi|695051445|ref|XP_009413747.1| | 0 | PREDICTED: gibberellin 20 oxidase 1-D [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|O04705|GAO1D_WHEAT | 4.00E-176 | Gibberellin 20 oxidase 1-D |
| trEMBL | tr|Q4PKR5|Q4PKR5_LOLPR | 2.00E-177 | Gibberellin 20-oxidase 1 {ECO:0000313|EMBL:AAY67841.1} |
| TAIR | AT5G51810 | 6.00E-155 | gibberellin 20 oxidase 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000061 | 2660828 | 2662733 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014663
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF14226.5 | DIOX_N | 40 | 139 | 3.40E-24 |
| PF03171.19 | 2OG-FeII_Oxy | 202 | 300 | 3.70E-29 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05282 | E1.14.11.12 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Diterpenoid biosynthesis | map00904 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016491 | Molecular Function | oxidoreductase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.970 |
| SRR2545915 | Juvenile tuber | 0.440 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.480 |
| SRR5643514 | five period of Gastrodia elata | 0.720 | |
| SRR5643515 | five period of Gastrodia elata | 2.240 | |
| SRR5643524 | five period of Gastrodia elata | 0.910 | |
| SRR5643525 | five period of Gastrodia elata | 0.400 | |
| SRR5643528 | five period of Gastrodia elata | 0.070 | |
| SRR5643658 | five period of Gastrodia elata | 0.000 | |
| SRR5643659 | five period of Gastrodia elata | 0.730 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.060 | |
| SRR5643662 | five period of Gastrodia elata | 0.310 | |
| SRR5643663 | five period of Gastrodia elata | 0.090 | |
| SRR5643664 | five period of Gastrodia elata | 0.170 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.200 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.830 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.040 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.820 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.700 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.410 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.120 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.630 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 4.400 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 2.030 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.620 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.620 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.14 |
| Juven | Juvenile tuber | 0.53 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.04 | |
| Mother_Juven | Mother tuber of Juvenile | 0.18 |