Detail information of GWHGAAEX014664/evm.TU.scaffold_60.84


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31021.00E-94Uncharacterized conserved protein
nrgi|743778619|ref|XP_010919773.1|2.52E-113PREDICTED: U6 snRNA phosphodiesterase [Elaeis guineensis]
trEMBLtr|M0RMC6|M0RMC6_MUSAM1.00E-109Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P29020_001}
TAIRAT5G511701.00E-94Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006129401812971826+
Transcript Sequence

Network for GWHGAAEX014664

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09749.8HVSL582823.20E-51
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0034477Biological ProcessU6 snRNA 3'-end processing
GO:0004518Molecular Functionnuclease activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.350
SRR2545915Juvenile tuber21.750
SRP108465SRR5643513five period of Gastrodia elata29.360
SRR5643514five period of Gastrodia elata29.480
SRR5643515five period of Gastrodia elata29.620
SRR5643524five period of Gastrodia elata27.960
SRR5643525five period of Gastrodia elata28.550
SRR5643528five period of Gastrodia elata32.970
SRR5643658five period of Gastrodia elata27.210
SRR5643659five period of Gastrodia elata30.240
SRR5643660five period of Gastrodia elata29.340
SRR5643661five period of Gastrodia elata27.280
SRR5643662five period of Gastrodia elata31.070
SRR5643663five period of Gastrodia elata31.130
SRR5643664five period of Gastrodia elata34.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.540
SRR6049655Rhizomagastrodiae_C368-T10_good_131.980
SRR6049656Rhizomagastrodiae_C368-T07_good_125.630
SRR6049657Rhizomagastrodiae_C368-T07_good_127.450
SRR6049658Rhizomagastrodiae_C368-T04_good_125.270
SRR6049659Rhizomagastrodiae_C368-T04_good_126.360
SRR6049660Rhizomagastrodiae_C368-T01_good_125.820
SRR6049661Rhizomagastrodiae_C368-T04_good_127.060
SRR6049662Rhizomagastrodiae_C368-T01_good_124.960
SRR6049663Rhizomagastrodiae_C368-T01_good_125.690
SRR6049664Rhizomagastrodiae_C368-T10_good_126.470
SRR6049665Rhizomagastrodiae_C368-T10_good_126.470
SRP279888GastroGastrodia elata tuber 53.13
JuvenJuvenile tuber53.97
Mother_GastroMother tuber of Gastrodia elata 61.34
Mother_JuvenMother tuber of Juvenile 62.09