Detail information of GWHGAAEX014666/evm.TU.scaffold_60.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34702.00E-34Beta-tubulin folding cofactor A
nrgi|702341958|ref|XP_010056517.1|7.50E-49PREDICTED: tubulin-folding cofactor A [Eucalyptus grandis]
Swissprottr|O04350|TBCA_ARATH6.00E-44Tubulin-folding cofactor A
trEMBLtr|A0A059C4A0|A0A059C4A0_EUCGR3.00E-49Uncharacterized protein {ECO:0000313|EMBL:KCW73288.1}
TAIRAT2G304102.00E-34tubulin folding cofactor A (KIESEL)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006130592423074079-
Transcript Sequence

Network for GWHGAAEX014666

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02970.15TBCA8873.40E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007021Biological Processtubulin complex assembly
GO:0007023Biological Processpost-chaperonin tubulin folding pathway
GO:0048487Molecular Functionbeta-tubulin binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms64.690
SRR2545915Juvenile tuber85.570
SRP108465SRR5643513five period of Gastrodia elata137.210
SRR5643514five period of Gastrodia elata233.050
SRR5643515five period of Gastrodia elata161.000
SRR5643524five period of Gastrodia elata221.310
SRR5643525five period of Gastrodia elata67.580
SRR5643528five period of Gastrodia elata77.400
SRR5643658five period of Gastrodia elata74.240
SRR5643659five period of Gastrodia elata87.660
SRR5643660five period of Gastrodia elata88.290
SRR5643661five period of Gastrodia elata90.690
SRR5643662five period of Gastrodia elata82.880
SRR5643663five period of Gastrodia elata81.450
SRR5643664five period of Gastrodia elata85.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_180.620
SRR6049655Rhizomagastrodiae_C368-T10_good_178.810
SRR6049656Rhizomagastrodiae_C368-T07_good_1116.430
SRR6049657Rhizomagastrodiae_C368-T07_good_177.560
SRR6049658Rhizomagastrodiae_C368-T04_good_160.360
SRR6049659Rhizomagastrodiae_C368-T04_good_146.840
SRR6049660Rhizomagastrodiae_C368-T01_good_168.000
SRR6049661Rhizomagastrodiae_C368-T04_good_165.970
SRR6049662Rhizomagastrodiae_C368-T01_good_1118.270
SRR6049663Rhizomagastrodiae_C368-T01_good_192.760
SRR6049664Rhizomagastrodiae_C368-T10_good_1145.630
SRR6049665Rhizomagastrodiae_C368-T10_good_1145.630
SRP279888GastroGastrodia elata tuber 90.18
JuvenJuvenile tuber120.60
Mother_GastroMother tuber of Gastrodia elata 60.99
Mother_JuvenMother tuber of Juvenile 62.51