Detail information of GWHGAAEX014675/evm.TU.scaffold_60.104


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30921.00E-153Casein kinase II, beta subunit
nrgi|672165247|ref|XP_008802520.1|0PREDICTED: casein kinase II subunit beta-like isoform X1 [Phoenix dactylifera]
Swissprottr|O80507|CSK2E_ARATH3.00E-154Putative casein kinase II subunit beta-4
trEMBLtr|A0A067HC53|A0A067HC53_CITSI4.00E-171Uncharacterized protein {ECO:0000313|EMBL:KDO85437.1}
TAIRAT2G446801.00E-153casein kinase II beta subunit 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006134901253514537+
Transcript Sequence

Network for GWHGAAEX014675

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01214.17CK_II_beta982817.30E-82
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03115CSNK2B Ribosome biogenesis in eukaryotes map03008
Wnt signaling pathwaymap04310
NF-kappa B signaling pathwaymap04064
Mitophagy - animalmap04137
Mitophagy - yeastmap04139
Adherens junctionmap04520
Circadian rhythm - plantmap04712

Gene Ontology

GO term OntologyName
GO:0019887Molecular Functionprotein kinase regulator activity
GO:0005956Cellular Componentprotein kinase CK2 complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms104.300
SRR2545915Juvenile tuber83.550
SRP108465SRR5643513five period of Gastrodia elata68.920
SRR5643514five period of Gastrodia elata64.760
SRR5643515five period of Gastrodia elata61.770
SRR5643524five period of Gastrodia elata64.930
SRR5643525five period of Gastrodia elata74.540
SRR5643528five period of Gastrodia elata66.070
SRR5643658five period of Gastrodia elata83.040
SRR5643659five period of Gastrodia elata79.270
SRR5643660five period of Gastrodia elata94.130
SRR5643661five period of Gastrodia elata87.230
SRR5643662five period of Gastrodia elata106.150
SRR5643663five period of Gastrodia elata91.980
SRR5643664five period of Gastrodia elata115.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_181.060
SRR6049655Rhizomagastrodiae_C368-T10_good_184.410
SRR6049656Rhizomagastrodiae_C368-T07_good_174.850
SRR6049657Rhizomagastrodiae_C368-T07_good_1101.400
SRR6049658Rhizomagastrodiae_C368-T04_good_1105.640
SRR6049659Rhizomagastrodiae_C368-T04_good_1127.000
SRR6049660Rhizomagastrodiae_C368-T01_good_198.960
SRR6049661Rhizomagastrodiae_C368-T04_good_197.160
SRR6049662Rhizomagastrodiae_C368-T01_good_165.030
SRR6049663Rhizomagastrodiae_C368-T01_good_174.890
SRR6049664Rhizomagastrodiae_C368-T10_good_171.990
SRR6049665Rhizomagastrodiae_C368-T10_good_171.990
SRP279888GastroGastrodia elata tuber 129.45
JuvenJuvenile tuber124.55
Mother_GastroMother tuber of Gastrodia elata 100.79
Mother_JuvenMother tuber of Juvenile 107.18