Detail information of GWHGAAEX014676/evm.TU.scaffold_60.105


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|302879251|ref|YP_003847815.1|3.00E-27peptidase C14 caspase catalytic subunit p20 [Gallionella capsiferriformans ES-2]
KOGKOG15460Metacaspase involved in regulation of apoptosis
nrgi|695003990|ref|XP_009388277.1|0PREDICTED: metacaspase-1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q7XJE6|MCA1_ARATH0Metacaspase-1
trEMBLtr|M0S921|M0S921_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P18300_001}
TAIRAT1G021700metacaspase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006135151623542300+
Transcript Sequence

Network for GWHGAAEX014676

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06943.11zf-LSD17311.50E-10
PF00656.21Peptidase_C14643355.30E-62
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.760
SRR2545915Juvenile tuber12.420
SRP108465SRR5643513five period of Gastrodia elata20.360
SRR5643514five period of Gastrodia elata22.630
SRR5643515five period of Gastrodia elata24.190
SRR5643524five period of Gastrodia elata25.330
SRR5643525five period of Gastrodia elata45.580
SRR5643528five period of Gastrodia elata45.870
SRR5643658five period of Gastrodia elata38.840
SRR5643659five period of Gastrodia elata14.600
SRR5643660five period of Gastrodia elata10.000
SRR5643661five period of Gastrodia elata16.350
SRR5643662five period of Gastrodia elata13.300
SRR5643663five period of Gastrodia elata12.780
SRR5643664five period of Gastrodia elata16.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.250
SRR6049655Rhizomagastrodiae_C368-T10_good_125.880
SRR6049656Rhizomagastrodiae_C368-T07_good_124.990
SRR6049657Rhizomagastrodiae_C368-T07_good_114.410
SRR6049658Rhizomagastrodiae_C368-T04_good_116.950
SRR6049659Rhizomagastrodiae_C368-T04_good_117.530
SRR6049660Rhizomagastrodiae_C368-T01_good_123.310
SRR6049661Rhizomagastrodiae_C368-T04_good_118.240
SRR6049662Rhizomagastrodiae_C368-T01_good_130.220
SRR6049663Rhizomagastrodiae_C368-T01_good_128.400
SRR6049664Rhizomagastrodiae_C368-T10_good_127.050
SRR6049665Rhizomagastrodiae_C368-T10_good_127.050
SRP279888GastroGastrodia elata tuber 13.56
JuvenJuvenile tuber28.37
Mother_GastroMother tuber of Gastrodia elata 43.64
Mother_JuvenMother tuber of Juvenile 58.46