Detail information of GWHGAAEX014685/evm.TU.scaffold_60.122


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|410479728|ref|YP_006767365.1|1.00E-13small heat shock protein,HSP20 [Leptospirillum ferriphilum ML-04]
KOGKOG07109.00E-31Molecular chaperone (small heat-shock protein Hsp26/Hsp42)
nrgi|212276212|ref|NP_001130454.1|1.05E-34uncharacterized protein LOC100191552 [Zea mays]
Swissprottr|Q84Q77|HS17A_ORYSJ3.00E-3617.9 kDa class I heat shock protein
trEMBLtr|B4F976|B4F976_MAIZE4.00E-35Uncharacterized protein {ECO:0000313|EMBL:ACF78669.1, ECO:0000313|EnsemblPlants:GRMZM2G306679_P01}
TAIRAT1G535409.00E-31HSP20-like chaperones superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006142028964203682+
Transcript Sequence

Network for GWHGAAEX014685

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.20HSP20921791.60E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.690
SRR2545915Juvenile tuber20.740
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.090
SRR5643515five period of Gastrodia elata0.120
SRR5643524five period of Gastrodia elata0.200
SRR5643525five period of Gastrodia elata1.500
SRR5643528five period of Gastrodia elata61.820
SRR5643658five period of Gastrodia elata2.080
SRR5643659five period of Gastrodia elata0.100
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.340
SRR5643662five period of Gastrodia elata0.110
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.340
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.170
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.150
SRR6049665Rhizomagastrodiae_C368-T10_good_10.150
SRP279888GastroGastrodia elata tuber 0.15
JuvenJuvenile tuber0.33
Mother_GastroMother tuber of Gastrodia elata 2.56
Mother_JuvenMother tuber of Juvenile 2.85