Detail information of GWHGAAEX014686/evm.TU.scaffold_60.123
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|406025106|ref|YP_006705407.1| | 1.00E-22 | Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B [Cardinium endosymbiont cEper1 of Encarsia pergandiella] |
| KOG | KOG0504 | 0 | FOG: Ankyrin repeat |
| nr | gi|695038878|ref|XP_009406960.1| | 0 | PREDICTED: ankyrin repeat-containing protein At5g02620-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q6AWW5|Y5262_ARATH | 6.00E-180 | Ankyrin repeat-containing protein At5g02620 |
| trEMBL | tr|M0TLW4|M0TLW4_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P02120_001} |
| TAIR | AT1G07710 | 0 | Ankyrin repeat family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000061 | 4203932 | 4208356 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014686
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF12796.6 | Ank_2 | 17 | 85 | 2.50E-07 |
| PF12796.6 | Ank_2 | 93 | 154 | 2.70E-11 |
| PF12796.6 | Ank_2 | 165 | 227 | 1.60E-11 |
| PF12796.6 | Ank_2 | 228 | 292 | 1.30E-07 |
| PF13962.5 | PGG | 347 | 459 | 5.10E-24 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005515 | Molecular Function | protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.510 |
| SRR2545915 | Juvenile tuber | 5.870 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.700 |
| SRR5643514 | five period of Gastrodia elata | 2.220 | |
| SRR5643515 | five period of Gastrodia elata | 1.440 | |
| SRR5643524 | five period of Gastrodia elata | 2.560 | |
| SRR5643525 | five period of Gastrodia elata | 2.480 | |
| SRR5643528 | five period of Gastrodia elata | 4.320 | |
| SRR5643658 | five period of Gastrodia elata | 2.930 | |
| SRR5643659 | five period of Gastrodia elata | 1.580 | |
| SRR5643660 | five period of Gastrodia elata | 2.580 | |
| SRR5643661 | five period of Gastrodia elata | 1.580 | |
| SRR5643662 | five period of Gastrodia elata | 2.020 | |
| SRR5643663 | five period of Gastrodia elata | 2.000 | |
| SRR5643664 | five period of Gastrodia elata | 1.340 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.680 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.710 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.190 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 3.640 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.190 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.490 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.870 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.180 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 3.430 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 2.730 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.220 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.220 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 2.87 |
| Juven | Juvenile tuber | 4.83 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 5.24 | |
| Mother_Juven | Mother tuber of Juvenile | 3.86 |