Detail information of GWHGAAEX014688/evm.TU.scaffold_60.125
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|17231878|ref|NP_488426.1| | 3.00E-71 | dihydropteroate synthase [Nostoc sp. PCC 7120] |
| KOG | KOG2544 | 0 | Dihydropteroate synthase/7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase/Dihydroneopterin aldolase |
| nr | gi|672198479|ref|XP_008777343.1| | 0 | PREDICTED: folic acid synthesis protein fol1-like isoform X2 [Phoenix dactylifera] |
| trEMBL | tr|F6HEZ6|F6HEZ6_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB51088.1} |
| TAIR | AT4G30000 | 0 | Dihydropterin pyrophosphokinase / Dihydropteroate synthase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000061 | 4365231 | 4372561 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014688
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01288.19 | HPPK | 72 | 197 | 1.20E-32 |
| PF00809.21 | Pterin_bind | 258 | 513 | 1.30E-80 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13941 | folKP | Metabolic pathways | map01100 |
| Folate biosynthesis | map00790 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009396 | Biological Process | folic acid-containing compound biosynthetic process |
| GO:0042558 | Biological Process | pteridine-containing compound metabolic process |
| GO:0044237 | Biological Process | cellular metabolic process |
| GO:0004156 | Molecular Function | dihydropteroate synthase activity |
| GO:0003848 | Molecular Function | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 9.150 |
| SRR2545915 | Juvenile tuber | 11.470 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 22.200 |
| SRR5643514 | five period of Gastrodia elata | 22.100 | |
| SRR5643515 | five period of Gastrodia elata | 19.940 | |
| SRR5643524 | five period of Gastrodia elata | 20.090 | |
| SRR5643525 | five period of Gastrodia elata | 10.690 | |
| SRR5643528 | five period of Gastrodia elata | 11.220 | |
| SRR5643658 | five period of Gastrodia elata | 9.340 | |
| SRR5643659 | five period of Gastrodia elata | 26.360 | |
| SRR5643660 | five period of Gastrodia elata | 26.030 | |
| SRR5643661 | five period of Gastrodia elata | 24.760 | |
| SRR5643662 | five period of Gastrodia elata | 23.310 | |
| SRR5643663 | five period of Gastrodia elata | 23.020 | |
| SRR5643664 | five period of Gastrodia elata | 18.330 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 22.120 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 24.640 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 24.590 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 19.470 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 16.310 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 15.090 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 20.150 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 19.380 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 26.680 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 25.960 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 26.790 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 26.790 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 16.93 |
| Juven | Juvenile tuber | 28.37 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 12.44 | |
| Mother_Juven | Mother tuber of Juvenile | 15.45 |