Detail information of GWHGAAEX014690/evm.TU.scaffold_60.127_evm.TU.scaffold_60.128


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428312582|ref|YP_007123559.1|3.00E-158nucleoside-diphosphate-sugar epimerase [Microcoleus sp. PCC 7113]
KOGKOG14290dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase
nrgi|695034234|ref|XP_009404621.1|0PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q8VZC0|UXS1_ARATH0UDP-glucuronic acid decarboxylase 1
trEMBLtr|A0A061ETB5|A0A061ETB5_THECC0UDP-glucuronic acid decarboxylase 1 isoform 1 {ECO:0000313|EMBL:EOY07632.1}
TAIRAT3G535200UDP-glucuronic acid decarboxylase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006144025344426044+
Transcript Sequence

Network for GWHGAAEX014690

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16363.4GDP_Man_Dehyd1244167.50E-58
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08678UXS1, uxs Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms50.120
SRR2545915Juvenile tuber34.400
SRP108465SRR5643513five period of Gastrodia elata63.490
SRR5643514five period of Gastrodia elata51.540
SRR5643515five period of Gastrodia elata64.180
SRR5643524five period of Gastrodia elata59.060
SRR5643525five period of Gastrodia elata61.170
SRR5643528five period of Gastrodia elata75.600
SRR5643658five period of Gastrodia elata61.330
SRR5643659five period of Gastrodia elata53.270
SRR5643660five period of Gastrodia elata52.620
SRR5643661five period of Gastrodia elata52.600
SRR5643662five period of Gastrodia elata42.420
SRR5643663five period of Gastrodia elata47.510
SRR5643664five period of Gastrodia elata35.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_150.460
SRR6049655Rhizomagastrodiae_C368-T10_good_148.640
SRR6049656Rhizomagastrodiae_C368-T07_good_155.050
SRR6049657Rhizomagastrodiae_C368-T07_good_160.910
SRR6049658Rhizomagastrodiae_C368-T04_good_178.740
SRR6049659Rhizomagastrodiae_C368-T04_good_187.370
SRR6049660Rhizomagastrodiae_C368-T01_good_166.220
SRR6049661Rhizomagastrodiae_C368-T04_good_166.600
SRR6049662Rhizomagastrodiae_C368-T01_good_153.680
SRR6049663Rhizomagastrodiae_C368-T01_good_169.960
SRR6049664Rhizomagastrodiae_C368-T10_good_158.640
SRR6049665Rhizomagastrodiae_C368-T10_good_158.640
SRP279888GastroGastrodia elata tuber 59.60
JuvenJuvenile tuber54.96
Mother_GastroMother tuber of Gastrodia elata 85.60
Mother_JuvenMother tuber of Juvenile 90.79