Detail information of GWHGAAEX014697/CADD01169.1.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|158333884|ref|YP_001515056.1|9.00E-179pyruvate dehydrogenase E1 component beta subunit [Acaryochloris marina MBIC11017]
KOGKOG05240Pyruvate dehydrogenase E1, beta subunit
nrgi|743878845|ref|XP_010908282.1|0PREDICTED: pyruvate dehydrogenase E1 component subunit beta isoform X1 [Elaeis guineensis]
Swissprottr|O64688|ODPB3_ARATH0Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic (Precursor)
trEMBLtr|G9FSF9|G9FSF9_ELAGV0Putative plastidial pyruvate dehydrogenase E1 beta protein {ECO:0000313|EMBL:AEW31333.1} (Fragment)
TAIRAT2G345900Transketolase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006149346114938618+
Transcript Sequence

Network for GWHGAAEX014697

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02779.23Transket_pyr1603301.40E-45
PF02780.19Transketolase_C3464675.30E-34
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00162PDHB, pdhB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620
HIF-1 signaling pathwaymap04066
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.120
SRR2545915Juvenile tuber28.150
SRP108465SRR5643513five period of Gastrodia elata63.360
SRR5643514five period of Gastrodia elata58.530
SRR5643515five period of Gastrodia elata71.230
SRR5643524five period of Gastrodia elata55.920
SRR5643525five period of Gastrodia elata15.980
SRR5643528five period of Gastrodia elata16.590
SRR5643658five period of Gastrodia elata17.100
SRR5643659five period of Gastrodia elata47.960
SRR5643660five period of Gastrodia elata49.240
SRR5643661five period of Gastrodia elata82.540
SRR5643662five period of Gastrodia elata54.450
SRR5643663five period of Gastrodia elata22.450
SRR5643664five period of Gastrodia elata37.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1175.570
SRR6049655Rhizomagastrodiae_C368-T10_good_1127.660
SRR6049656Rhizomagastrodiae_C368-T07_good_1199.730
SRR6049657Rhizomagastrodiae_C368-T07_good_1191.390
SRR6049658Rhizomagastrodiae_C368-T04_good_1108.540
SRR6049659Rhizomagastrodiae_C368-T04_good_194.660
SRR6049660Rhizomagastrodiae_C368-T01_good_1142.160
SRR6049661Rhizomagastrodiae_C368-T04_good_1168.040
SRR6049662Rhizomagastrodiae_C368-T01_good_1153.800
SRR6049663Rhizomagastrodiae_C368-T01_good_1102.760
SRR6049664Rhizomagastrodiae_C368-T10_good_1161.630
SRR6049665Rhizomagastrodiae_C368-T10_good_1161.630
SRP279888GastroGastrodia elata tuber 25.82
JuvenJuvenile tuber274.41
Mother_GastroMother tuber of Gastrodia elata 52.45
Mother_JuvenMother tuber of Juvenile 48.34