Detail information of GWHGAAEX014704/evm.TU.scaffold_60.143


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|209965972|ref|YP_002298887.1|1.00E-42penicillin-binding protein [Rhodospirillum centenum SW]
nrgi|743772995|ref|XP_010916823.1|5.09E-119PREDICTED: uncharacterized protein LOC105041577 [Elaeis guineensis]
trEMBLtr|M0T4M1|M0T4M1_MUSAM6.00E-103Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P06230_001}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006150608205069076+
Transcript Sequence

Network for GWHGAAEX014704

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00912.21Transgly1032579.80E-49
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.520
SRR2545915Juvenile tuber22.740
SRP108465SRR5643513five period of Gastrodia elata11.590
SRR5643514five period of Gastrodia elata16.630
SRR5643515five period of Gastrodia elata18.860
SRR5643524five period of Gastrodia elata17.380
SRR5643525five period of Gastrodia elata49.420
SRR5643528five period of Gastrodia elata55.160
SRR5643658five period of Gastrodia elata45.250
SRR5643659five period of Gastrodia elata16.590
SRR5643660five period of Gastrodia elata14.620
SRR5643661five period of Gastrodia elata14.370
SRR5643662five period of Gastrodia elata17.970
SRR5643663five period of Gastrodia elata18.620
SRR5643664five period of Gastrodia elata17.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.200
SRR6049655Rhizomagastrodiae_C368-T10_good_112.700
SRR6049656Rhizomagastrodiae_C368-T07_good_116.560
SRR6049657Rhizomagastrodiae_C368-T07_good_110.360
SRR6049658Rhizomagastrodiae_C368-T04_good_17.770
SRR6049659Rhizomagastrodiae_C368-T04_good_15.920
SRR6049660Rhizomagastrodiae_C368-T01_good_18.340
SRR6049661Rhizomagastrodiae_C368-T04_good_111.840
SRR6049662Rhizomagastrodiae_C368-T01_good_18.490
SRR6049663Rhizomagastrodiae_C368-T01_good_16.190
SRR6049664Rhizomagastrodiae_C368-T10_good_112.810
SRR6049665Rhizomagastrodiae_C368-T10_good_112.810
SRP279888GastroGastrodia elata tuber 17.49
JuvenJuvenile tuber5.81
Mother_GastroMother tuber of Gastrodia elata 18.01
Mother_JuvenMother tuber of Juvenile 9.43