Gene detail

Detail information of GWHGAAEX014708/evm.TU.scaffold_60.146

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|116253715\|ref\|YP_769553.1\|	6.00E-25	glycosyl transferase (sulfolipid biosynthesis) protein [Rhizobium leguminosarum bv. viciae 3841]
KOG	KOG1950	7.00E-155	Glycosyl transferase, family 8 - glycogenin
nr	gi\|672170407\|ref\|XP_008805263.1\|	0	PREDICTED: UDP-glucuronate:xylan alpha-glucuronosyltransferase 2-like [Phoenix dactylifera]
Swissprot	tr\|Q8GWW4\|GUX2_ARATH	0	UDP-glucuronate:xylan alpha-glucuronosyltransferase 2
trEMBL	tr\|A0A067GZX3\|A0A067GZX3_CITSI	0	Uncharacterized protein {ECO:0000313\|EMBL:KDO84195.1}
TAIR	AT1G54940	7.00E-155	plant glycogenin-like starch initiation protein 4

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000061	5248836	5251727	-

Transcript Sequence
>GWHTAAEX014708 CTCCAAATCAATATACAATATTACAAATTTCTTTTTAGCAGTTGCAATACAGCTGAGCCCAATCAATCCAAACAATGAAGAAGAAAAACCTACCCAAAAGAAAAATGGACGAAAACCGCAGCAATTTTCCAAACAGATGACACGAAAAATCTCAAGGCAATGACAGATGAACCGAAGGCCCAAACACTAAGCAATCCTCTGCCTTCTCCATTTCCTCACTCTTCCTACCAACATCCCAACCACTACAAGAACACAAACTTTGATTGGCCTGTCAATTTAATAGCCCCCCACAGTATCTTTTGAACAACAAAGAGAACAGCAAACATTCCAGCGATGGCTTTGGGAGAAATGATGAAGGCTGCTGCATCAAAAAATTTGGTTATTAAAATCAACCTCATCTTCCTCTCCTTCTTCCTTACTGCCTACCTGGCCCTTCTCCTCCAGCCTTCTGCTTCCAATCAGCAGAGAGCTGGTTCCTCTGCTAGATGCACTCCTCACAATTGCCATGTCAAGAAGATTGAGGGCATCCCCAGCTTCTTTAACAAACTTCCAGGGAACAGCAGCATAGCTCTGGTTAACGTCCAGAAGGATGAACTCTTGGATTGGGAAGCGGTCGGGGTGGCGAGTTCGATCGAATTTGAGAAGGTTTCAGAGAATTTGGAGTGGAAGGATGTATTTCCTGAATGGATAGATGAGGAGGAAGAGAATGAGGGGGCAACTTGCCCTGAGATACCAATGCCTGACTTGTCAGTGTATGGCCAATTCGATGCAGTGGTGGTGAGGGCGCCTTGCCGGCGGCCAGAGGAGGGGTGGCGGAGAGATGTGTTTAGGCTCCAAGTGCACCTCATTGCTGCAAATGTGGCAGTGAGAAGGGGGAAGAGGGATGAGAAAGGGGAGGTGAAGCTGGTGTTTTATGGGAGTTGCCGGCCGATGATGGAGGTTTTCAGGTGCGACGATATGGTGGGAAGGGAAGGGGAATGGCGGATGTATCAAGTGGAGGCAGATAGGTTGGAGCAGAAGGTGGCAATGCCTGTAGGGTCTTGCAAGCTGGCTTTGCCATTGTGGAAGGAAGGGAGCGTTAACGAAGAGTACGAGGCACGGAAGCAATCGCGCCGCCCCAGCGCATTCTCCGGCCGCCGCGAAGCTTACGCGACGCTGATCCATTCCTCAGATGCATACGTCTGCGGCGCCATAACCTTAGCACAAAGCATCCGCAAGACGGGATCCACAAAAGACCTCATACTCCTCCACGACACCTCCGTACCTCCCCTCAAGCTCAGAGCACTGGCAGCCTCCGGATGGCTTCTCCGCAAAATCAAACGCATCCGCAACCCCCACGCCCAAAGGTACACATACAACGAATACAACTACAGCAAATTCAGGCTATGGCTTCTGACGGACTACCATAGGGTCGTGTTCGTAGACGCGGACATCATCGTCCTCCGAAACCTCGACCTCCTGTTCTCCTTCCCCCAAATCTCGGCCACGGGAAACGACGGGTCCATCTTCAACTCCGGCATAATGGTTTTGGAGCCTTCAGAATGCACCTTCCGAACCCTCATGAAGAATCGCGGCCGGATCGTGTCCTACAACGGCGGCGATCAAGGCTTCCTCAATCAGATGTTCGTCTGGTGGCACCGATTGCCTCGGAGAGTCAATTTCCTCAAGAACTTTTGGTCGAACAGGACAGCTGAGATCGATTTGAAGAACCATCTGTTCTCCTCGGACCCGCCCAAGCTGTACTCCATCCATTACCTCGGACTGAAGCCGTGGGTCTGCTACAGGGATTACGATTGCAATTGGAACGTCGAGGGCGGGAGGGTTTATGCGAGCGATCCCGCGCACCGGAGATGGTGGAGGCTGCACGACGATATGGACGATGGCCTCAAGCTTTTCTGCGGGCTTTCGCCGGAGAGGACGGACGATCTGGAGAGGGATAGGAAGAGGGCTCGGGATTTGGGCTTCGCGGATCGGCACTGGAAGATTCCCATCACCGATTCTAGAAGGCAGAGGCCTGAAATCATGTGACGGCACGTGACCTTTTTGCCAACGTCGGAAAGGCTTAAATTGTGGGATGATTTGAGACTTATTCATGATGGTCTCAGTGGGCCGTGGTTTATCTCTGGTGATTTTAATTGTATTCGCTTCAATCATGAAAAAGTTGGTGGCACTTCTTCTTTGATCTCCAAACTTGCTGCTTTTAACAATTGTTTAAATTCAGTTGGATTAATTGATTTGCAATTCACTGGGAGTAGCCTTTATACGTGGGATAATCACAGATTGAATTCTCCAATTAAGGCCAAGCTTGACATATGTTTGAGCAATAATGTTTGGTTTGATAATTTTCCGGAAGTTTTTATAAGGTTCTTCCTCCCGGAACCTCGGACCACTCACCTCTTCTTATCACTGGGCCTCCTCCATTAAGGCTTCCGACCAGATTTTGCTTTAAAAATTATTGG

Network for GWHGAAEX014708

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01501.19	Glyco_transf_8	277	480	1.60E-08

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT8

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016757	Molecular Function	transferase activity, transferring glycosyl groups

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	14.560
SRP064423	SRR2545915	Juvenile tuber	14.280
SRP108465	SRR5643513	five period of Gastrodia elata	7.610
	SRR5643514	five period of Gastrodia elata	7.170
	SRR5643515	five period of Gastrodia elata	4.700
	SRR5643524	five period of Gastrodia elata	5.280
	SRR5643525	five period of Gastrodia elata	25.600
	SRR5643528	five period of Gastrodia elata	25.430
	SRR5643658	five period of Gastrodia elata	66.390
	SRR5643659	five period of Gastrodia elata	9.540
	SRR5643660	five period of Gastrodia elata	11.790
	SRR5643661	five period of Gastrodia elata	11.880
	SRR5643662	five period of Gastrodia elata	12.340
	SRR5643663	five period of Gastrodia elata	13.710
	SRR5643664	five period of Gastrodia elata	19.900
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.060
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	11.460
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.270
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.820
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.360
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.880
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	9.500
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.090
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.830
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.220
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.840
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.840
SRP279888	Gastro	Gastrodia elata tuber	11.08
	Juven	Juvenile tuber	10.09
	Mother_Gastro	Mother tuber of Gastrodia elata	6.78
	Mother_Juven	Mother tuber of Juvenile	8.40