Detail information of GWHGAAEX014715/evm.TU.scaffold_61.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|37522694|ref|NP_926071.1|4.00E-88UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Gloeobacter violaceus PCC 7421]
nrgi|672189167|ref|XP_008813769.1|2.25E-141PREDICTED: uncharacterized protein LOC103724323 [Phoenix dactylifera]
trEMBLtr|M0S3K2|M0S3K2_MUSAM2.00E-128Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P27450_001}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000058658865693259-
Transcript Sequence

Network for GWHGAAEX014715

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00275.19EPSP_synthase183007.10E-53
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.740
SRR2545915Juvenile tuber7.820
SRP108465SRR5643513five period of Gastrodia elata1.470
SRR5643514five period of Gastrodia elata3.030
SRR5643515five period of Gastrodia elata2.280
SRR5643524five period of Gastrodia elata3.530
SRR5643525five period of Gastrodia elata0.550
SRR5643528five period of Gastrodia elata0.640
SRR5643658five period of Gastrodia elata0.430
SRR5643659five period of Gastrodia elata1.140
SRR5643660five period of Gastrodia elata1.000
SRR5643661five period of Gastrodia elata1.010
SRR5643662five period of Gastrodia elata0.690
SRR5643663five period of Gastrodia elata0.620
SRR5643664five period of Gastrodia elata0.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.180
SRR6049655Rhizomagastrodiae_C368-T10_good_12.810
SRR6049656Rhizomagastrodiae_C368-T07_good_13.900
SRR6049657Rhizomagastrodiae_C368-T07_good_13.330
SRR6049658Rhizomagastrodiae_C368-T04_good_12.490
SRR6049659Rhizomagastrodiae_C368-T04_good_11.610
SRR6049660Rhizomagastrodiae_C368-T01_good_13.200
SRR6049661Rhizomagastrodiae_C368-T04_good_16.800
SRR6049662Rhizomagastrodiae_C368-T01_good_13.960
SRR6049663Rhizomagastrodiae_C368-T01_good_11.270
SRR6049664Rhizomagastrodiae_C368-T10_good_13.010
SRR6049665Rhizomagastrodiae_C368-T10_good_13.010
SRP279888GastroGastrodia elata tuber 0.52
JuvenJuvenile tuber0.92
Mother_GastroMother tuber of Gastrodia elata 1.62
Mother_JuvenMother tuber of Juvenile 0.70