Gene detail

Detail information of GWHGAAEX014722/evm.TU.scaffold_61.22

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|189502744\|ref\|YP_001958461.1\|	6.00E-38	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOG	KOG0192	0	Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
nr	gi\|695025653\|ref\|XP_009400086.1\|	0	PREDICTED: serine/threonine-protein kinase EDR1-like isoform X3 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9FPR3\|EDR1_ARATH	2.00E-77	Serine/threonine-protein kinase EDR1
trEMBL	tr\|V4W286\|V4W286_9ROSI	0	Uncharacterized protein {ECO:0000313\|EMBL:ESR60039.1}
TAIR	AT3G58640	0	Mitogen activated protein kinase kinase kinase-related

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000058	933916	1024908	-

Transcript Sequence
>GWHTAAEX014722 CGGAGCCACTCGGCCCACTGCAGTTCCAAAACCAAACATCCGTTCCTCACTTGATTTCTCATTGGTCGCCGATACCTCCCTGGACTCCAGATCGCAGGCCGACGAAGCCTTCAGCACCTGCTGTTGCTGCAGATCTTCGATATTCGAGACGCAGAGTCCGATACTTCTGCCTGCAGATCTTCTTTCCCAGTTCTGGCATCTAGGATTGTGACTGGAAAACAAAGTGGAGATAATTCTTTTTTTGATGTGGTCTTCATCCTAAGCAGTCAAATAACTTGTGTTTTTTCCGACAAGGCTCCATTCTAGGCAAAGATCACCAGCCAGAAATAGATGGAAAAATAAAAGATCAGAAATAGATGTTATAAAAGAAACATAATACTGCTTTATGCTGATACAAGGTATTCTCCATGAACAATAGCTAATAATTTGGTGAAATTTTCTGCCAAGATGCTCTGTACTTCCGTATGCTTGAAAAATGGAGGGGATACCTAGTGATTCAGGAAACTCCAATGCTAATTGGTTTCCATCAGATTTTGTGGAAAAGTTTCAGTCCGTGTCAGTAGTTTCACGAGAAGAAAATTTGAATACAAGAGTGCCTGCTTGTAATGAAATTAAAGTTGGAATCTCAGCACAGTCTGCTTCACAAACTTTGTGGCTCACTGGAACCTTGTCCTGCCCAATACCCAATGGCTTTTACTGCATCATTCCTGATAAAAAGTTCATGGATCTTTTTAATACTATTCCCACTCCGGATGAACTTTATACTTTGGGTGCAGAGGGACTTAAAGCTGATGTTATTCTTGTTGATGCAGATAAAGACAAGAAGCTTTCCATGTTGAAGCAGTTGAGTGCAGCGCTTGTTAAAGGATTAAACAGCAATCCCGCTTTACTAATAAAAAAAATAGCTGGTTTAGTTTTTGACTTCTATAAGCGCCCAAACTCTGAACAAAGTCCTGCAAAAAATGTGGTTGAAGATGCCTCTCATTTGATAGATAATAAAGGCATCCAACTTTTGGGGCAGATAAGACATGGATCATGCAGACCCCGTGCAATTCTATTCAAGGTTCTTGCAGATTCTGTTGGCCTTGAAAGCAAGCTTATGGTGGGTCTTCCCCAAGATGGTGGCATTGATTGCGCAGACTCCTACAAGCACATATCTGTGGTGGTTACATTAAACTCTGTGGAACTATTAGTCGACCTTATGCGTTTTCCTGGACAGTTGATTCCCTTTTCAACAAAAGCTATCATGATATCTCACATTTCTGCAGCAGCGGAAAGTGATTCTGCTGAAAATGACTCCTGTGATTCTCCTCTTGAACCAAATAGCCCTTTGTGTGGGTTTTCAGATAGAATGGATGGTGATAGTGCGTCTCACAGTGAACCAAATATTGCAAATGCGTTTTGGAGGCGTAGCAGAAGGAAAGCTGTTGCTGAACAGCAACGCACAGCAAGTTCAAGTCCCGAGCACCCACTTTCCAAAACCCGTGGTCGATCCATGCTTGGTGGTGATAGGCAATCATTTACAGAATATGGTGCAGCAGGATCAAGGTCAGATGGTTCTTCAACTTCTGAAGTTCGTAGGATTCGAAGGAGGAGCATCAGTATTACACCGGAGATTGGTGATGACATTGTCAGAGCTGTACGTGCTATGAATGAAACACTGAAGCAAAATCGCCTTGTGAGGGATCCTGGTGATGGCCACTCTTCAGGTTCTGGAAATGATAAATCAAATGATCTGACAAAGCACAAAGATGTAGAGCTCAATGTATATTTAAGGAAGCCGATTAATGCTACCCAGAGAGCAGCTTCATTGCCTTCATCGCCTCATGAATTCAGAGAAAAGGATTCCGAGAGAGGCGATTCTTCTCATTTTCTGAGGATTGAAGACTTTCAGTCCACCTTGAACAAAATTCTCCAGTCTCAGTTTCTAAATAAACCTTTGCTACCTTTTGAAGAATGGAGCATTGATTTCTCAGAATTGACTGTGGGTACCCGTGTTGGTATAGGGTTTTTTGGAGAAGTTTTTCGTGGCATATGGAATGGCACAGATGTAGCAATTAAAGTTTTTCTAGAACAAGATCTGACGACTGAAAACATTGAAGATTTCTGCAATGAGATATCAATTCTCAGCCGGCTCAGGCATCCAAATGTTATATTATTTCTGGGCGCTTGCATGAAGCCTCCCCATTTATCTATGGTTACTGAATACATGGAGATGGGATCTCTGTATTATTTAATACACATGAGTGGCCAGAAAAAGAAGCTGAGCTGGCGCAGAAGATTGAAAATGCTCCGTGATATCTGCAGGGGGCTTATGTGCATTCACCGCTTGAAAATAGTTCATCGTGATCTCAAGAGTGCAAATTGCTTGGTGAATAAGCACTGGACAGTTAAAATATGTGATTTTGGGCTTTCGCGATTGTTGAGCGACGACCCAATGAAGGATACCTCTTCTGCCGGCACCCCTGAATGGATGGCTCCTGAGCTTATCCGTAATGAGCCAATCACCGAAAAATGCGACATTTTCAGTCTTGGAGTCATTATGTGGGAGCTCTGCACCCTCAACAGGCCCTGGGAAGGTGTCCCGGCAGTTCAAGTGGTATATGCTGTCGCCAACGAGGGCACAAGATTGGAGATACCTGAGGGTCCCCTTGGTAAACTTATCGTGGATTGCTGGGCTGAACCCAACGAGCGGCCGAGCTGCCAAGAGATCCTCACAAGGCTGCTTGACTGTGAGTATAGTCTCTGTTGATTTCATCTCCTCCTCCGCCTGCCTGCCTGCATGTATATCAATGTAGAGTCATATTGTTAAACTTTTGCCTGTAAATTTTTCAATTTTCATTCCCCCCCCCCTCCCTTTTTAGAGCTATTGTTGAGCACTTTGGTATTTAGTCTATACAGCTTATATTTATATGATTTTGTTGCTCTGCGTTGTATGAAATAATAAGACAACGGTTCACTCTGTTCTGAAAGTTCTCTTAATGATACAACAGAATGCGTGAATTTCTCCTCCGAGTATTCATTTGGAGGTTTGTTTAAATTAATGGTTGCTTTGTTGTATAAATATTTTCTTACTGCTCCTTTTGGCAAATGGAAG

Network for GWHGAAEX014722

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14381.5	EDR1	52	250	1.30E-52
PF07714.16	Pkinase_Tyr	503	750	2.30E-61

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	TKL_CTR1-DRK-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0005524	Molecular Function	ATP binding
GO:0004672	Molecular Function	protein kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	25.240
SRP064423	SRR2545915	Juvenile tuber	31.500
SRP108465	SRR5643513	five period of Gastrodia elata	32.420
	SRR5643514	five period of Gastrodia elata	37.260
	SRR5643515	five period of Gastrodia elata	32.280
	SRR5643524	five period of Gastrodia elata	34.350
	SRR5643525	five period of Gastrodia elata	26.840
	SRR5643528	five period of Gastrodia elata	26.140
	SRR5643658	five period of Gastrodia elata	28.430
	SRR5643659	five period of Gastrodia elata	31.210
	SRR5643660	five period of Gastrodia elata	30.430
	SRR5643661	five period of Gastrodia elata	31.460
	SRR5643662	five period of Gastrodia elata	36.050
	SRR5643663	five period of Gastrodia elata	33.060
	SRR5643664	five period of Gastrodia elata	32.840
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	32.120
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	40.160
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	33.580
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	27.340
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	27.150
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	28.620
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	29.800
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	31.050
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	39.940
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	36.270
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	41.850
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	41.850
SRP279888	Gastro	Gastrodia elata tuber	35.71
	Juven	Juvenile tuber	32.46
	Mother_Gastro	Mother tuber of Gastrodia elata	30.02
	Mother_Juven	Mother tuber of Juvenile	29.90