Gene detail

Detail information of GWHGAAEX014732/evm.TU.scaffold_61.56

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0239	0	Kinesin (KAR3 subfamily)
nr	gi\|743858716\|ref\|XP_010942427.1\|	0	PREDICTED: kinesin-4-like [Elaeis guineensis]
Swissprot	tr\|O81635\|ATK4_ARATH	3.00E-104	Kinesin-4
trEMBL	tr\|M0RTU2\|M0RTU2_MUSAM	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT5G27550	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000058	3108801	3124879	+

Transcript Sequence
>GWHTAAEX014732 ATGCAAACCCTTCTCTTTCCTTCGTTCTTCCGCCTTTGGTTCTCGATTTTTTTTGTCTGGCTCCGCCCCTACATTCTTAGGCCTCACCATCACTGCCTGAGCCATTGTGATCTCGTCCTGAAGCAGCAAAGCCAATCCTTTGATCTGCGACTGCGATTTAAGGTGGTTGTCCTTACCTGTGAGCCGATGATTGATATTGTCAATGTTGTCCCAGCAGATATGGATGGCGCTCGGGCTTTTTCTCTCATTTGGAGATTTGAAGCCAAACCAACAACATTTGAAGAAATTTCTGAAAATTACAACAGCATGGGAGAGATAATCGAAGATGACTACTTCATTCCATCTCCTATACTAAGGGGCACCTCAGATCCCTCCTCCTTAGGCCTTGATCCTATAACAGCCCTTCAAAAAATTGGGATCAAATATAACGATTTGTTGGAGGAGCATTGGGCTAAGCATTATGAAGTTGAAGTTTTGCGCACAATCTTACTCAACAAGTGCCTTCAGGAATGCCAGTTCAAGCACGAAGCCATCGAAAAGAAGCATTATGAATGTAAGAATCTAATTTCTGAAGCTGAGTTGCTACGAGCAAAAATTGATGTTCTAGGCAACAAATGCTTCCAAGAATGCAGACCTAAATACAATGCTTTGAAAGATATTCTAGCCAAAGAGACTTCCGAGAGAAAGCGTTTATATAATGAAGTGATTGAACTTAGAGGAAATATTAGGGTTTTCTGTAGATGCAGGCCACTCAGCGCAGATGAGGTTTCCAAGGATTATAATTCTACCATCGATTTTGACCCTTGTAAAGATACTGAATTGCAAATTACATGCACCGACTTGTCGAGAAAGATATTTAAATTTGACTGTGTTTTCAATCCTAAGGATGACCAAGAGGTTGTATTTGCTGAGACTTTGCCAGTGGTAAAATCTGTTATGGATGGCTTTAATGTTTGCATATTCGCATATGGGCAGACAGGAACAGGGAAAACATTCACCATGGAGGGAAGTCCTGAATGCAGAGGCGTGAATTATAGGGCCTTGAAGGAACTCTTTAGGATTATGAAAGAGAGAATTCGGCTAATGCGTTATGATTTTTCATTCAGTATGCTGGAGGTGTACAATGAGAAAATCAAGGATCTTCTGGCAGAAAACTCAGATTCATATACCAAGAAGTTGGACATAAAGCAATCTGCGGAAGGAACCCAAGAAGTTCCTGGGCTGACTGAAGTTCAAGTATGCAGTATTGATGAGGTGTGGAAGCTGCATAAATTGGGCGGAAAAAATCGATCTGTTGGATCAACAACTGCTAATGAGCTCAGTAGCCGTTCCCATTCCTTGGTTCGTGTGATGGTCATGGGCGAGAACTTAGTGACTGGGGAGAGGAGCAGAAGCTTCTTGTGGTTGGTGGATTTGGCTGGCAGCGAACGTGTGGGAAAGATCGAAGTTGAGGGGGAGAGACTTAAAGAGTCACAGTTTATAAACAAATCTCTATCGGCTCTTGGAGATGTTATCTCAGCGCTTGCCTCCAAGAACTCCCACATTCCATATAGGAACTCAAAGCTGACTCATTTGCTCCAAAGCTCCCTCGGTGGGGACTGTAAGACATTGATGTTCGCACAGATTAGCCCTAGTCCCGCTGATTTAGGGGAAACTCTCTGCACTCTTAATTTTGCTAGCAGAGTGCGGGGAGTTGAGCATGGCCCTGCAAGAAAGCAATCTGATTCTGCGGATAGCTTTAAGATCAAACAGATGGCCGAAAAGCTTAGGTTGGAAGAAAAGCAAGTGAGCAAACTTAATGAAAGTTTGCAGATGATGCATATCAAGTATGCATCGCGTGAAAATGTCATTAGAAGTCTTCAAGAAAAGGTTAGGGAATCGGAGCATGCATGCAAGGACTACCAACAAAAGATCACTGACTTGGAGAATCATCTTGCTGCAGAGAGAAAAGGCAAAAGAACCGTGTTAGGCAGCGCTGTAAACGCTAAGGCCGCATCATCTCTCCGGCCGCTGCCGGCGTCTGGTGCGGAGCCCAGGCAAAGGCTGCCACTTGCGAGAATCACGAACCTCCTCCCTCCTTTGGTTCCTCCTCTGCCTCATTATCATCACAGGGCCTCTGCTGCTAAGGAGAACACAATAAGCATTGGATGGTCCAAACCATCATCTTTTGCTGGAAAAGCTAGAAGGATATCGCTGTCCCCGATCGTCTGCAGCAGCAGCATATCGAAAAATACGACAGGAGCTGCTGCTGCTGTTAAGGAGGATGATGCCTCGTCGAAGCTTCCGCAGCTGAGCACGATGATGATGCGGAGGAGGAGGGCCACGCTTGCTACCGCGGCAGCGTTACAAGGGACTCCGATTGGAGGGGAGGGGGGGAAGTCTCGTTTGCAGCAGCAGCAGCAGACGTTGTGGAAAGCAAGGCTTCCTTCTTCTTCTCCATTGCAGCAGCTGCCAGGCAAGTTGTGCTACAGCATCCACAAGAGAGTCCTTTTGGGGGCGTCTCCGGCCAGGCCAGCCAACCTCTTGGAAGCTAAGGAGATTCCGGGAAGGTTCGGAGTTGCTGGCCGAATTTTGATCAAGAACCGCCGGAGGAGCGTAGCCATTTAG

Network for GWHGAAEX014732

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	247	564	7.20E-104

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0008017	Molecular Function	microtubule binding
GO:0005524	Molecular Function	ATP binding
GO:0003777	Molecular Function	microtubule motor activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	42.180
SRP064423	SRR2545915	Juvenile tuber	36.350
SRP108465	SRR5643513	five period of Gastrodia elata	59.220
	SRR5643514	five period of Gastrodia elata	53.710
	SRR5643515	five period of Gastrodia elata	59.890
	SRR5643524	five period of Gastrodia elata	53.450
	SRR5643525	five period of Gastrodia elata	70.900
	SRR5643528	five period of Gastrodia elata	67.740
	SRR5643658	five period of Gastrodia elata	80.520
	SRR5643659	five period of Gastrodia elata	63.410
	SRR5643660	five period of Gastrodia elata	67.570
	SRR5643661	five period of Gastrodia elata	64.660
	SRR5643662	five period of Gastrodia elata	67.460
	SRR5643663	five period of Gastrodia elata	65.280
	SRR5643664	five period of Gastrodia elata	72.630
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	64.010
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	49.450
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	66.020
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	59.770
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	68.250
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	70.190
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	64.600
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	65.250
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	74.870
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	73.100
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	70.080
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	70.080
SRP279888	Gastro	Gastrodia elata tuber	67.51
	Juven	Juvenile tuber	67.99
	Mother_Gastro	Mother tuber of Gastrodia elata	87.45
	Mother_Juven	Mother tuber of Juvenile	88.06