Gene detail

Detail information of GWHGAAEX014735/evm.TU.scaffold_61.63

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1829	2.00E-172	Uncharacterized conserved protein, contains C1, PH and RUN domains
nr	gi\|743757697\|ref\|XP_010923213.1\|	0	PREDICTED: uncharacterized protein LOC105046349 [Elaeis guineensis]
trEMBL	tr\|M0S308\|M0S308_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P25510_001}
TAIR	AT3G48200	2.00E-172	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000058	3383693	3413159	+

Transcript Sequence
>GWHTAAEX014735 TTGACTCGAATGTAAGAATGGGCTTTCCCTTTCTGGCAAAAAGAGTGATTTCTGTAATAACGAAGGAGAAGCTTTTCGTAGCAGAGTGCCATGTCCAAAGCCGGCTCCTAGGTCTGATATCTCTGCAAAATCAGCAGTACTCGTCTAATTTCATGCTTCGATCAGAGTAAGGCTTACCTGATCGCTTTCCAACCTTCATATTTTTAAAGCTTTCTTTTTTCGCCCCTTGAATCGGAGCAGTTCCGCAAGAACCTTGGTCGTGAATTCCACTCTCTAAGTAACTGATACGATCTCCAGTGCTCTCTGTTCTAACTGATTCCGAGAGAAAATGATTGCTTAATTGGTAGTCAAGGTGATCCATGGCGACTTAAAACTCTTCTAAAAGATCTCATCACATTCTTGTGCTCTTGTCTTGATGATTAATGGAAGGAGAATTCGAGTGGGATGCTCCACCAAATCCCTCCGATGAGTGGTCCCCCCGGCCGGATCGCTGCTCCGATGCTGATGTCGGCGATTCTTCTCCGGCTTCATCCAATTTTTCATCTTGCAACGGATCTGATTTTGATCGGTACTGTAGTGCGAATTCGGTGCTGGAGAGTGCGAGCATCTGCAGTTCGATCGGATATTACAGCGGTATTGGAGACGAGTTTTCTTCGGAGGGCTACAGCTTCAGAGGGAAGTTTTTGAGAACTCGTGGGAATGGAAAGGAATGTTTGCCAGATGGTGGAGCTGAAACTCCAAGAGCTAATGGTTCTAATGAGAGTCCATTGGCTAGGTCGAATAATACTAGCTCTTGGCTGATTCACGGCTTCACAGAGATCTCCTCTTCATCATGCTATGACATATGCGGGGAAGGCAATACTGAAAAATCACTGTTACCCCACCTTGTAAAGGGAAAAGGGGTTTCTTCTTCTTCTTTCGTTAATTGTTCTTTCGGAGATAACGGTGATGGTGATTTGGAGAAGAGTGTCTTGAGTGCAGAATTATGGAACAGACAAAACGGAATTCATTTGGATATAGATATTGGGAGTGTGATAAAGCTTGAAACCAATGAAGATGTCTCTCCTCAGTCAAAACATTCTGAGAGTGAGGGTTCAATGCTTGATGATGGAATTGATAGTGAAGGCAGAATTCAATCTTGTGAAAGGAGCTTTAAGCTTGTTGAGAAAACTAACCAGGAGGATAGGAATCCACCTTTTGTAAGCTCTTATGTTGCTTTTGGATCCAATGATTGGGGTGAATTAATGCATGATACAGAAAGTGGTGGTTTGTCTTCACTCTCTTTGCATCTGGATCAATCATTTCAGCATCAAGATGAGCATATTGGAAGAGAATCTGAGGAAAAGGTGCAAGATATATTTGCTAGTTTTGAGGCTGAAAATCTTAAAGTTAAGGATGCGGGGAGTTGTAGTTATGTATCAACAATCAATCCTAAGGTACATGTTATTGATATACACTCCCATATGAGGGGTAGTAGCTGTAATATAATAAATAGTCATGGAGTTGATGCTGTTGATCAAACTGCAAAAAATTCAGAATATGACAGTGCCCCTGTTTTGCAAAACACGCTATCAGTAGGTAATGAAGTGAAAGGGTATTTAAATTCTATGTTTGATACTGCCAAAAGTAAATTTCAATCTTCACATAATGAAGAAAATGCTGTCAAAGGTGTAATTAGAACTTCTGAAACAAATTTAAATGGTGAATCTGAACTCCTAGTTGATAGTCTTGCCAGCAGTAATGTAATGATGAAGACTTCCCACAAATTGAATGCGTCAGGTGGTGAAATTATGAGACATGAAATTTTTAAGCATAGTAGTATACTTTCTTTGAGTAATAACGGTGACAGTTCTACCTTACAAAGTTTTCAGGAGAAGAGCCTGGGTTATCCTCGTTTAATTAAAGCAAATGTTCAAGAAAGTGAGGTCAAGAAACTAGATGCATATGATTCTTATGATGAAATGGTTCTTGAAATGGAAGAAATTTTACTTGATTCGGGAAACTGCCAAGGATCCACGAACCTGCAAGCTAACCAAAATTCTATGAGCCATCATCCACGTCATTTTGGAGATGACAGTTCAACTGTTTCTGCCACAGATGATCAACCTGTCCTAGTTTCTTCCAAAATTGATAGAGCGGAGGTCGTTGGGGCCAAGCAGAAGAAGGGAGATGTTTCTTTTGGGGAGAGATTAGTTGGCGTCCGGGAGTATACAATGTATCAAATAAAAGTGTGGAGCGGTATGGATGAATGGAAGGTTGAACGGCGCTACCGTGATTTCTTTTCTCTTTATTGTCAATTGAAAGCTCTTTTCACCAGTCATGGCCTGAGTCTTCCTTCTGCATGGTTCAATGTTGAACGGGACTCCAGAAAATTATTTGGAAATGCTTCTCCAAATGTTGTCTTGGAAAGAAGTATTCTTATTGAAGATTGCCTTCGATCCATCCTGAACTCTAAATATCCTTTTGGGAATCCTAGCCCTTTGATTATGTTCTTAACTCCTGGAAAAATAATGCTCAAGCCTGGACTCCTGCGTTCACTTGTTCCTTATTATCTGCAGAAGTTATCTGAAGATGCATACCCAGATGATACTTCATTGTTGGGGAAGACCATATCTCTTGTAGTTGAGGTTAAACCTCACAAGTCTTTAAGGCAATTACTAGAAATACAACATTATACATGTGCAGGGTGTCACAGACATCTTGATGCTGGAAAGACCCTCTTTCGGGAACTTGTGCAGACATTTGGGTGGAACAGGCCCCGGTTTTGTGAATATACGGGTCAGTTATTTTGTGCATCATGCCATACAAACGACACTAGTGTTTTGCCAGCACGAGTATTACATCACTGGGATTTTACCTTATATTCAGTCTCCCAGTTTGCCAAAGCATATCTTGAATCCATCTATGAGCAGCCTATGCTCTGTGTGAGTGCAGTCAATCCCTTTCTATTTTCCAAAGTTCCAGCTTTACATCATGTCATGAATTTCAGAAAGAAAATAGGTGCTATGCTTCCGTATGTAAACTGCCCATTCAGGAGTTCTATTGAAAAAAGCCTTGGATTTCGCAGGCATTTTCTTGAAAGCAATGACTTTTTTGCTCTTAGAGATTTAGTAGATTTATCAAAAGGGCCATTTTCAGCACTTCCTATGATGGTGGAGAATATTTCAAACCTAATCTTCGAGCACATCACACAACAATGCCTTGTATGCTATGATTCTGGTGTTTCTTGTGGTGCTCGTCAAGCTTGTCATGATCCCGTTTCTTTGATTTTTCCATTTCAGGAAGTAGAAGTTGAGAATTGCGCTTCATGTGGGTCTATATTTCACAAGGCCTGCTACGTCGATCTTCTTGGATGTCCTTGCAGTAATAACTCTGCCTTAGGCAAAAGTTATGGTCCTGAAGAACCAAGTATGATAGGATCCGGCCAGGGACCTATTAGAGTTTTGGATACATCTATTCATCCCCGTGTTTCAAATCCCGTAACAGGCTTCTTTACAAATATTCTCACCAAGGTCAAGTCTGATAAGATATGGAAGCCAAAAGGCAGCAGCCCGGTTATACTCATGAGTTCATTACCAAGCTCGCCCTCATAATTATAGTTTCTTATCTTCGAGGCATCATTTGGGGAAAGCATAACAGGAGCCCCTTCTCTTACCCTTGTGTCTGCAGTCCCAACTGCACTGTTACTACTTGCCAAACAAGCAGTTGGACCTTCTACCATTTAACCAGATCTGCATTGTGACGGTTTGTGTAGGTTTCAAGTCTTGTGGGCTAAAAGGAAAGATAAATTTACCAATAGTTCCCCAAATTAGTCCCAAACTGTTACAAACTACTCAATTGATCCCTAGTCAATTGCAGTTTGGGACTAAACGGTCAACAAAATAGTCAAATGATTATTTTGGCAGATTTCCTTAAATGTTTTAGGAAGTTGCTCTTGTATTTGACGCCTGGAAGTAATGACTCTCGACATGGATTTGATTAAAGAATTTATAATGACAAAGGGGAAGTATTGTGAATCTCACTTGCATAAAGATTACTTAATTGCAGTAAGATTGGGGTTTACCATTAACAAAACAGGCTTTTACTGTTTCAATCCCTCTTCTTTCTTTTACTAGTTAGAGTGCATTCTGTGGTAGTAACATATGCTTTGGTGTCTAAATCGTTTCATTCTTCTTTTTTTTTTCATTCATTTTTGGGTTTGCCATTAGTGTCCTTCACAACACTGTGCGTGTACAAGGGTTGATGCTTTGGACAATGAGATTGGAAGATTAGAAAAATGTGTTCAGAAATGTGAAGTGTGAAGCTATGGCAATTGATTTCTTTCATCTACATATTGTATTGTAGATGTATTGACTGCAATGTTAACTGGAGGAGGTCATACTGTTCTTCACTTTGGTGATGATTTTTTTTTTTTCTTTCAGTCCTTTTCATCTGGCACTCCTTTCTAAACTTTCTTAGGTTGTGAACATTTAATCTTTGATGTTAACATCCTTTAATTTTTATCTAACCACTATATTCATCTTAAAATATGCTTATGATTCACGTGG

Network for GWHGAAEX014735

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00787.23	PX	593	678	7.50E-07
PF13901.5	zf-RING_9	780	980	2.20E-53

Protein Sequence

>GWHPAAEX014735
MEGEFEWDAPPNPSDEWSPRPDRCSDADVGDSSPASSNFSSCNGSDFDRYCSANSVLESASICSSIGYYSGIGDEFSSEGYSFRGKFLRTRGNGKECLPDGGAETPRANGSNESPLARSNNTSSWLIHGFTEISSSSCYDICGEGNTEKSLLPHLVKGKGVSSSSFVNCSFGDNGDGDLEKSVLSAELWNRQNGIHLDIDIGSVIKLETNEDVSPQSKHSESEGSMLDDGIDSEGRIQSCERSFKLVEKTNQEDRNPPFVSSYVAFGSNDWGELMHDTESGGLSSLSLHLDQSFQHQDEHIGRESEEKVQDIFASFEAENLKVKDAGSCSYVSTINPKVHVIDIHSHMRGSSCNIINSHGVDAVDQTAKNSEYDSAPVLQNTLSVGNEVKGYLNSMFDTAKSKFQSSHNEENAVKGVIRTSETNLNGESELLVDSLASSNVMMKTSHKLNASGGEIMRHEIFKHSSILSLSNNGDSSTLQSFQEKSLGYPRLIKANVQESEVKKLDAYDSYDEMVLEMEEILLDSGNCQGSTNLQANQNSMSHHPRHFGDDSSTVSATDDQPVLVSSKIDRAEVVGAKQKKGDVSFGERLVGVREYTMYQIKVWSGMDEWKVERRYRDFFSLYCQLKALFTSHGLSLPSAWFNVERDSRKLFGNASPNVVLERSILIEDCLRSILNSKYPFGNPSPLIMFLTPGKIMLKPGLLRSLVPYYLQKLSEDAYPDDTSLLGKTISLVVEVKPHKSLRQLLEIQHYTCAGCHRHLDAGKTLFRELVQTFGWNRPRFCEYTGQLFCASCHTNDTSVLPARVLHHWDFTLYSVSQFAKAYLESIYEQPMLCVSAVNPFLFSKVPALHHVMNFRKKIGAMLPYVNCPFRSSIEKSLGFRRHFLESNDFFALRDLVDLSKGPFSALPMMVENISNLIFEHITQQCLVCYDSGVSCGARQACHDPVSLIFPFQEVEVENCASCGSIFHKACYVDLLGCPCSNNSALGKSYGPEEPSMIGSGQGPIRVLDTSIHPRVSNPVTGFFTNILTKVKSDKIWKPKGSSPVILMSSLPSSPS

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0035091	Molecular Function	phosphatidylinositol binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	60.450
SRP064423	SRR2545915	Juvenile tuber	73.560
SRP108465	SRR5643513	five period of Gastrodia elata	22.780
	SRR5643514	five period of Gastrodia elata	21.930
	SRR5643515	five period of Gastrodia elata	22.350
	SRR5643524	five period of Gastrodia elata	21.890
	SRR5643525	five period of Gastrodia elata	27.320
	SRR5643528	five period of Gastrodia elata	20.200
	SRR5643658	five period of Gastrodia elata	25.120
	SRR5643659	five period of Gastrodia elata	29.570
	SRR5643660	five period of Gastrodia elata	34.490
	SRR5643661	five period of Gastrodia elata	27.230
	SRR5643662	five period of Gastrodia elata	33.520
	SRR5643663	five period of Gastrodia elata	32.120
	SRR5643664	five period of Gastrodia elata	39.930
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	30.850
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	19.320
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	22.590
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	38.140
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	26.820
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	32.390
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	27.870
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	25.660
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	18.310
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	20.570
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	20.010
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	20.010
SRP279888	Gastro	Gastrodia elata tuber	26.49
	Juven	Juvenile tuber	37.14
	Mother_Gastro	Mother tuber of Gastrodia elata	20.78
	Mother_Juven	Mother tuber of Juvenile	28.46