Detail information of GWHGAAEX014749/evm.TU.scaffold_61.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16323.00E-106Uncharacterized PHD Zn-finger protein
nrgi|643724850|gb|KDP34051.1|3.99E-115hypothetical protein JCGZ_07622 [Jatropha curcas]
Swissprottr|Q9M2B4|ALFL3_ARATH8.00E-107PHD finger protein ALFIN-LIKE 3, N-terminally processed
trEMBLtr|A0A067KCV1|A0A067KCV1_JATCU1.00E-115Uncharacterized protein {ECO:0000313|EMBL:KDP34051.1}
TAIRAT3G427903.00E-106alfin-like 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005849484244981308+
Transcript Sequence

Network for GWHGAAEX014749

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12165.7Alfin121391.30E-66
PF00628.28PHD1992453.60E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAlfin-like

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042393Molecular Functionhistone binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms81.910
SRR2545915Juvenile tuber57.720
SRP108465SRR5643513five period of Gastrodia elata37.890
SRR5643514five period of Gastrodia elata43.850
SRR5643515five period of Gastrodia elata40.580
SRR5643524five period of Gastrodia elata41.910
SRR5643525five period of Gastrodia elata68.080
SRR5643528five period of Gastrodia elata64.690
SRR5643658five period of Gastrodia elata68.050
SRR5643659five period of Gastrodia elata61.210
SRR5643660five period of Gastrodia elata71.270
SRR5643661five period of Gastrodia elata67.850
SRR5643662five period of Gastrodia elata79.470
SRR5643663five period of Gastrodia elata72.850
SRR5643664five period of Gastrodia elata80.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_145.130
SRR6049655Rhizomagastrodiae_C368-T10_good_148.120
SRR6049656Rhizomagastrodiae_C368-T07_good_139.780
SRR6049657Rhizomagastrodiae_C368-T07_good_155.160
SRR6049658Rhizomagastrodiae_C368-T04_good_168.630
SRR6049659Rhizomagastrodiae_C368-T04_good_175.330
SRR6049660Rhizomagastrodiae_C368-T01_good_154.170
SRR6049661Rhizomagastrodiae_C368-T04_good_153.560
SRR6049662Rhizomagastrodiae_C368-T01_good_141.710
SRR6049663Rhizomagastrodiae_C368-T01_good_150.500
SRR6049664Rhizomagastrodiae_C368-T10_good_143.370
SRR6049665Rhizomagastrodiae_C368-T10_good_143.370
SRP279888GastroGastrodia elata tuber 85.70
JuvenJuvenile tuber48.30
Mother_GastroMother tuber of Gastrodia elata 40.11
Mother_JuvenMother tuber of Juvenile 28.33