Detail information of GWHGAAEX014762/evm.TU.scaffold_62.13
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|337286837|ref|YP_004626310.1| | 6.00E-47 | adenylate kinase [Thermodesulfatator indicus DSM 15286] |
| KOG | KOG3078 | 4.00E-107 | Adenylate kinase |
| nr | gi|672165943|ref|XP_008802890.1| | 6.56E-121 | PREDICTED: adenylate kinase, chloroplastic-like isoform X5 [Phoenix dactylifera] |
| Swissprot | tr|Q6ZC69|KAD2_ORYSJ | 4.00E-113 | Probable adenylate kinase 2, chloroplastic (Precursor) |
| trEMBL | tr|M0TK35|M0TK35_MUSAM | 7.00E-121 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P23490_001} |
| TAIR | AT5G47840 | 4.00E-107 | adenosine monophosphate kinase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000060 | 918763 | 941474 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014762
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00406.21 | ADK | 92 | 268 | 2.30E-46 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00939 | adk, AK | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Biosynthesis of antibiotics | map01130 | ||
| Purine metabolism | map00230 | ||
| Thiamine metabolism | map00730 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006139 | Biological Process | nucleobase-containing compound metabolic process |
| GO:0016776 | Molecular Function | phosphotransferase activity, phosphate group as acceptor |
| GO:0019205 | Molecular Function | nucleobase-containing compound kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004017 | Molecular Function | adenylate kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.990 |
| SRR2545915 | Juvenile tuber | 15.380 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 16.820 |
| SRR5643514 | five period of Gastrodia elata | 19.460 | |
| SRR5643515 | five period of Gastrodia elata | 19.290 | |
| SRR5643524 | five period of Gastrodia elata | 20.730 | |
| SRR5643525 | five period of Gastrodia elata | 31.310 | |
| SRR5643528 | five period of Gastrodia elata | 36.300 | |
| SRR5643658 | five period of Gastrodia elata | 39.530 | |
| SRR5643659 | five period of Gastrodia elata | 20.620 | |
| SRR5643660 | five period of Gastrodia elata | 19.370 | |
| SRR5643661 | five period of Gastrodia elata | 20.610 | |
| SRR5643662 | five period of Gastrodia elata | 30.210 | |
| SRR5643663 | five period of Gastrodia elata | 29.380 | |
| SRR5643664 | five period of Gastrodia elata | 29.440 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.470 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.150 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 24.150 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 18.340 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 20.840 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 21.360 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 16.420 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 19.470 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 27.720 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 25.820 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 23.080 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 23.080 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 26.91 |
| Juven | Juvenile tuber | 18.03 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 23.76 | |
| Mother_Juven | Mother tuber of Juvenile | 20.97 |