Detail information of GWHGAAEX014773/evm.TU.scaffold_62.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG02656.00E-111U5 snRNP-specific protein-like factor and related proteins
nrgi|695049696|ref|XP_009412792.1|0PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Musa acuminata subsp. malaccensis]
trEMBLtr|M0TLD4|M0TLD4_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P00320_001}
TAIRAT5G19920_26.00E-111Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006016758841760133+
Transcript Sequence

Network for GWHGAAEX014773

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.31WD404604820.17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.280
SRR2545915Juvenile tuber12.910
SRP108465SRR5643513five period of Gastrodia elata7.580
SRR5643514five period of Gastrodia elata9.560
SRR5643515five period of Gastrodia elata8.070
SRR5643524five period of Gastrodia elata8.410
SRR5643525five period of Gastrodia elata8.160
SRR5643528five period of Gastrodia elata7.750
SRR5643658five period of Gastrodia elata8.360
SRR5643659five period of Gastrodia elata7.710
SRR5643660five period of Gastrodia elata11.310
SRR5643661five period of Gastrodia elata9.800
SRR5643662five period of Gastrodia elata10.800
SRR5643663five period of Gastrodia elata9.250
SRR5643664five period of Gastrodia elata10.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.030
SRR6049655Rhizomagastrodiae_C368-T10_good_115.640
SRR6049656Rhizomagastrodiae_C368-T07_good_113.020
SRR6049657Rhizomagastrodiae_C368-T07_good_116.290
SRR6049658Rhizomagastrodiae_C368-T04_good_115.380
SRR6049659Rhizomagastrodiae_C368-T04_good_116.120
SRR6049660Rhizomagastrodiae_C368-T01_good_115.550
SRR6049661Rhizomagastrodiae_C368-T04_good_114.450
SRR6049662Rhizomagastrodiae_C368-T01_good_112.620
SRR6049663Rhizomagastrodiae_C368-T01_good_113.450
SRR6049664Rhizomagastrodiae_C368-T10_good_114.120
SRR6049665Rhizomagastrodiae_C368-T10_good_114.120
SRP279888GastroGastrodia elata tuber 11.82
JuvenJuvenile tuber17.55
Mother_GastroMother tuber of Gastrodia elata 11.81
Mother_JuvenMother tuber of Juvenile 17.26