Detail information of GWHGAAEX014795/evm.TU.scaffold_62.54
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|154252030|ref|YP_001412854.1| | 1.00E-85 | hydroxyacylglutathione hydrolase [Parvibaculum lavamentivorans DS-1] |
| KOG | KOG0813 | 2.00E-148 | Glyoxylase |
| nr | gi|743806935|ref|XP_010927891.1| | 3.52E-173 | PREDICTED: hydroxyacylglutathione hydrolase 2, mitochondrial-like [Elaeis guineensis] |
| Swissprot | tr|Q8LDW8|GLO2D_ARATH | 1.00E-157 | Probable hydroxyacylglutathione hydrolase 2, chloroplast (Precursor) |
| trEMBL | tr|M0TVH1|M0TVH1_MUSAM | 9.00E-168 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P32190_001} |
| TAIR | AT2G31350 | 2.00E-148 | glyoxalase 2-5 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000060 | 2450329 | 2469798 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014795
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00753.26 | Lactamase_B | 73 | 229 | 2.30E-19 |
| PF16123.4 | HAGH_C | 230 | 314 | 2.40E-25 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01069 | gloB, gloC, HAGH | Metabolic pathways | map01100 |
| Pyruvate metabolism | map00620 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0019243 | Biological Process | methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione |
| GO:0004416 | Molecular Function | hydroxyacylglutathione hydrolase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 35.050 |
| SRR2545915 | Juvenile tuber | 19.060 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 24.460 |
| SRR5643514 | five period of Gastrodia elata | 14.810 | |
| SRR5643515 | five period of Gastrodia elata | 34.900 | |
| SRR5643524 | five period of Gastrodia elata | 25.880 | |
| SRR5643525 | five period of Gastrodia elata | 51.280 | |
| SRR5643528 | five period of Gastrodia elata | 64.230 | |
| SRR5643658 | five period of Gastrodia elata | 47.240 | |
| SRR5643659 | five period of Gastrodia elata | 15.750 | |
| SRR5643660 | five period of Gastrodia elata | 10.360 | |
| SRR5643661 | five period of Gastrodia elata | 10.700 | |
| SRR5643662 | five period of Gastrodia elata | 21.870 | |
| SRR5643663 | five period of Gastrodia elata | 16.700 | |
| SRR5643664 | five period of Gastrodia elata | 13.320 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.280 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 19.270 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 15.250 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 15.100 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 22.910 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 24.760 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 16.970 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 24.010 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 19.500 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 16.730 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 18.130 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 18.130 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 20.29 |
| Juven | Juvenile tuber | 15.76 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 68.80 | |
| Mother_Juven | Mother tuber of Juvenile | 98.06 |