Detail information of GWHGAAEX014796/evm.TU.scaffold_62.55


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|51246482|ref|YP_066366.1|5.00E-29NAD(P)H steroid dehydrogenase [Desulfotalea psychrophila LSv54]
KOGKOG14303.00E-76C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases
nrgi|743762606|ref|XP_010908970.1|1.45E-179PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3 isoform X2 [Elaeis guineensis]
Swissprottr|A9X4U2|HSDD3_ARATH3.00E-1243beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3
trEMBLtr|M0TK66|M0TK66_MUSAM4.00E-172Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P23800_001}
TAIRAT2G434203.00E-763-beta hydroxysteroid dehydrogenase/isomerase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006024975302512363+
Transcript Sequence

Network for GWHGAAEX014796

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01073.183Beta_HSD162883.50E-49
PF02453.16Reticulon3885448.60E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K235583BETAHSDD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Steroid biosynthesismap00100

Gene Ontology

GO term OntologyName
GO:0006694Biological Processsteroid biosynthetic process
GO:0055114Biological Processoxidation-reduction process
GO:0003854Molecular Function3-beta-hydroxy-delta5-steroid dehydrogenase activity
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.540
SRR2545915Juvenile tuber11.240
SRP108465SRR5643513five period of Gastrodia elata18.950
SRR5643514five period of Gastrodia elata19.310
SRR5643515five period of Gastrodia elata17.600
SRR5643524five period of Gastrodia elata21.260
SRR5643525five period of Gastrodia elata17.400
SRR5643528five period of Gastrodia elata16.560
SRR5643658five period of Gastrodia elata22.690
SRR5643659five period of Gastrodia elata18.730
SRR5643660five period of Gastrodia elata15.550
SRR5643661five period of Gastrodia elata17.640
SRR5643662five period of Gastrodia elata12.770
SRR5643663five period of Gastrodia elata15.490
SRR5643664five period of Gastrodia elata10.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.610
SRR6049655Rhizomagastrodiae_C368-T10_good_124.650
SRR6049656Rhizomagastrodiae_C368-T07_good_119.270
SRR6049657Rhizomagastrodiae_C368-T07_good_115.240
SRR6049658Rhizomagastrodiae_C368-T04_good_111.630
SRR6049659Rhizomagastrodiae_C368-T04_good_19.090
SRR6049660Rhizomagastrodiae_C368-T01_good_112.880
SRR6049661Rhizomagastrodiae_C368-T04_good_114.780
SRR6049662Rhizomagastrodiae_C368-T01_good_123.340
SRR6049663Rhizomagastrodiae_C368-T01_good_117.880
SRR6049664Rhizomagastrodiae_C368-T10_good_122.350
SRR6049665Rhizomagastrodiae_C368-T10_good_122.350
SRP279888GastroGastrodia elata tuber 14.30
JuvenJuvenile tuber15.56
Mother_GastroMother tuber of Gastrodia elata 9.68
Mother_JuvenMother tuber of Juvenile 13.91