Detail information of GWHGAAEX014804/evm.TU.scaffold_62.65
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|37526096|ref|NP_929440.1| | 4.00E-50 | hypothetical protein plu2180 [Photorhabdus luminescens subsp. laumondii TTO1] |
| KOG | KOG4203 | 0 | Armadillo/beta-Catenin/plakoglobin |
| nr | gi|703127920|ref|XP_010103966.1| | 0 | Uridine kinase-like protein 3 [Morus notabilis] |
| Swissprot | tr|O65583|UKL4_ARATH | 0 | Putative uracil phosphoribosyltransferase |
| trEMBL | tr|W9RM57|W9RM57_9ROSA | 0 | Uridine kinase-like protein 3 {ECO:0000313|EMBL:EXB97669.1} |
| TAIR | AT1G55810 | 0 | uridine kinase-like 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000060 | 2989810 | 3100124 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014804
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00485.17 | PRK | 47 | 174 | 7.50E-23 |
| PF00485.17 | PRK | 240 | 298 | 6.70E-15 |
| PF14681.5 | UPRTase | 328 | 529 | 7.00E-73 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00876 | udk, UCK | Metabolic pathways | map01100 |
| Pyrimidine metabolism | map00240 | ||
| Drug metabolism - other enzymes | map00983 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009116 | Biological Process | nucleoside metabolic process |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0016301 | Molecular Function | kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 15.060 |
| SRR2545915 | Juvenile tuber | 16.090 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.360 |
| SRR5643514 | five period of Gastrodia elata | 9.920 | |
| SRR5643515 | five period of Gastrodia elata | 9.710 | |
| SRR5643524 | five period of Gastrodia elata | 10.230 | |
| SRR5643525 | five period of Gastrodia elata | 12.650 | |
| SRR5643528 | five period of Gastrodia elata | 10.640 | |
| SRR5643658 | five period of Gastrodia elata | 12.970 | |
| SRR5643659 | five period of Gastrodia elata | 10.030 | |
| SRR5643660 | five period of Gastrodia elata | 8.800 | |
| SRR5643661 | five period of Gastrodia elata | 8.240 | |
| SRR5643662 | five period of Gastrodia elata | 10.250 | |
| SRR5643663 | five period of Gastrodia elata | 9.620 | |
| SRR5643664 | five period of Gastrodia elata | 10.290 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.260 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 15.460 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 16.870 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 15.470 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 21.010 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 22.520 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 19.760 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.610 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 19.400 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 23.660 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 15.940 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 15.940 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 9.68 |
| Juven | Juvenile tuber | 11.92 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 10.56 | |
| Mother_Juven | Mother tuber of Juvenile | 8.58 |