Detail information of GWHGAAEX014805/evm.TU.scaffold_62.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|159042401|ref|YP_001541653.1|2.00E-1250S ribosomal protein L7Ae [Caldivirga maquilingensis IC-167]
KOGKOG31664.00E-16160S ribosomal protein L7A
nrgi|115475908|ref|NP_001061550.1|3.05E-173Os08g0326400 [Oryza sativa Japonica Group]
Swissprottr|P35685|RL7A_ORYSJ1.00E-17560S ribosomal protein L7a
trEMBLtr|A2Z2X9|A2Z2X9_ORYSI1.00E-173Putative uncharacterized protein {ECO:0000313|EMBL:EAZ09690.1}
TAIRAT3G628704.00E-161Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006031600583174535-
Transcript Sequence

Network for GWHGAAEX014805

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01248.25Ribosomal_L7Ae1162043.30E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02936RP-L7Ae, RPL7A Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0042254Biological Processribosome biogenesis
GO:1990904Cellular Componentribonucleoprotein complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms124.310
SRR2545915Juvenile tuber137.890
SRP108465SRR5643513five period of Gastrodia elata182.580
SRR5643514five period of Gastrodia elata189.340
SRR5643515five period of Gastrodia elata160.810
SRR5643524five period of Gastrodia elata173.670
SRR5643525five period of Gastrodia elata63.730
SRR5643528five period of Gastrodia elata77.980
SRR5643658five period of Gastrodia elata51.810
SRR5643659five period of Gastrodia elata161.290
SRR5643660five period of Gastrodia elata162.200
SRR5643661five period of Gastrodia elata184.580
SRR5643662five period of Gastrodia elata131.640
SRR5643663five period of Gastrodia elata142.470
SRR5643664five period of Gastrodia elata130.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1158.060
SRR6049655Rhizomagastrodiae_C368-T10_good_1235.160
SRR6049656Rhizomagastrodiae_C368-T07_good_1198.130
SRR6049657Rhizomagastrodiae_C368-T07_good_1155.560
SRR6049658Rhizomagastrodiae_C368-T04_good_1156.120
SRR6049659Rhizomagastrodiae_C368-T04_good_1126.210
SRR6049660Rhizomagastrodiae_C368-T01_good_1170.160
SRR6049661Rhizomagastrodiae_C368-T04_good_1174.590
SRR6049662Rhizomagastrodiae_C368-T01_good_1232.380
SRR6049663Rhizomagastrodiae_C368-T01_good_1211.170
SRR6049664Rhizomagastrodiae_C368-T10_good_1240.290
SRR6049665Rhizomagastrodiae_C368-T10_good_1240.290
SRP279888GastroGastrodia elata tuber 149.92
JuvenJuvenile tuber156.65
Mother_GastroMother tuber of Gastrodia elata 76.96
Mother_JuvenMother tuber of Juvenile 92.90