Detail information of GWHGAAEX014816/evm.TU.scaffold_62.84
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|719978026|ref|XP_010249037.1| | 6.67E-162 | PREDICTED: peroxidase 55-like [Nelumbo nucifera] |
| Swissprot | tr|Q96509|PER55_ARATH | 2.00E-133 | Peroxidase 55 (Precursor) |
| trEMBL | tr|A0A0A0LML2|A0A0A0LML2_CUCSA | 4.00E-156 | Uncharacterized protein {ECO:0000313|EMBL:KGN63165.1} |
| TAIR | AT5G14130 | 8.00E-133 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000060 | 3839258 | 3841094 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014816
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 69 | 305 | 4.20E-70 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0004601 | Molecular Function | peroxidase activity |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 44.910 |
| SRR2545915 | Juvenile tuber | 89.700 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 297.870 |
| SRR5643514 | five period of Gastrodia elata | 256.590 | |
| SRR5643515 | five period of Gastrodia elata | 271.620 | |
| SRR5643524 | five period of Gastrodia elata | 255.100 | |
| SRR5643525 | five period of Gastrodia elata | 31.280 | |
| SRR5643528 | five period of Gastrodia elata | 32.730 | |
| SRR5643658 | five period of Gastrodia elata | 29.590 | |
| SRR5643659 | five period of Gastrodia elata | 221.440 | |
| SRR5643660 | five period of Gastrodia elata | 204.870 | |
| SRR5643661 | five period of Gastrodia elata | 164.530 | |
| SRR5643662 | five period of Gastrodia elata | 117.410 | |
| SRR5643663 | five period of Gastrodia elata | 172.460 | |
| SRR5643664 | five period of Gastrodia elata | 78.490 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 279.610 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 214.200 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 399.830 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 248.240 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 162.950 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 94.970 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 245.280 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 307.150 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 331.900 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 259.150 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 355.510 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 355.510 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 28.95 |
| Juven | Juvenile tuber | 172.05 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 13.38 | |
| Mother_Juven | Mother tuber of Juvenile | 25.07 |