Detail information of GWHGAAEX014826/evm.TU.scaffold_62.106
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|32471474|ref|NP_864467.1| | 7.00E-25 | serine/threonine-protein kinase pknA [Rhodopirellula baltica SH 1] |
| KOG | KOG1187 | 0 | Serine/threonine protein kinase |
| nr | gi|672134890|ref|XP_008791099.1| | 0 | PREDICTED: serine/threonine-protein kinase PBS1-like [Phoenix dactylifera] |
| Swissprot | tr|Q9FE20|PBS1_ARATH | 0 | Serine/threonine-protein kinase PBS1 |
| trEMBL | tr|W1P8R3|W1P8R3_AMBTC | 0 | Uncharacterized protein {ECO:0000313|EMBL:ERN06257.1} |
| TAIR | AT5G13160 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000060 | 4729834 | 4769189 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014826
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 114 | 381 | 6.20E-48 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13430 | PBS1 | Plant-pathogen interaction | map04626 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 19.480 |
| SRR2545915 | Juvenile tuber | 16.740 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 44.330 |
| SRR5643514 | five period of Gastrodia elata | 43.210 | |
| SRR5643515 | five period of Gastrodia elata | 61.640 | |
| SRR5643524 | five period of Gastrodia elata | 50.120 | |
| SRR5643525 | five period of Gastrodia elata | 75.290 | |
| SRR5643528 | five period of Gastrodia elata | 122.260 | |
| SRR5643658 | five period of Gastrodia elata | 55.740 | |
| SRR5643659 | five period of Gastrodia elata | 45.770 | |
| SRR5643660 | five period of Gastrodia elata | 49.740 | |
| SRR5643661 | five period of Gastrodia elata | 51.430 | |
| SRR5643662 | five period of Gastrodia elata | 54.500 | |
| SRR5643663 | five period of Gastrodia elata | 43.420 | |
| SRR5643664 | five period of Gastrodia elata | 49.850 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 32.720 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 24.180 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 34.490 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 26.930 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 28.450 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 26.520 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 28.030 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 28.190 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 34.280 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 35.280 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 43.480 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 43.480 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 40.68 |
| Juven | Juvenile tuber | 31.58 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 114.95 | |
| Mother_Juven | Mother tuber of Juvenile | 80.86 |