Gene detail

Detail information of GWHGAAEX014829/evm.TU.scaffold_62.112

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672122730\|ref\|XP_008784704.1\|	0	PREDICTED: uncharacterized protein LOC103703575 isoform X1 [Phoenix dactylifera]
trEMBL	tr\|M0RUP6\|M0RUP6_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P23160_001}
TAIR	AT1G78540	6.00E-152	SH2 domain protein B

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000060	4882475	4918331	-

Transcript Sequence
>GWHTAAEX014829 ACCCCCGGCGAGCAGAAGCGGGACAAACTAGAACGGGCTTCTCGTCTCAACCTCCCCCCCCCTCTCTCTCTCTAAAACTCGAAACGCACTTTCTCTCTTTATAAACCCTAGAACCACTTTTTCACCGGCGATGACTGCCGGAGAATGTGGCGAGGAGGAGTACCTAATGCTTAAGGATGTCCGAATAGGCCTCAATCGGGATGGAGTCGTTGGCGAGGAGGTCTTTACGGGTTTTGCTGTATGCCTCTGGATTTATCTCACTAATTCATCTCGAACTTCATCTGTGATTCTTCAGCAGGTTTCAACAGCAAATGAGGATGAATTTCCTTTTCTTGCAATTAATGAAGAAAACAAATTGATCCTCTTTCCCTTGATGTTCTTGCACAATGAAGCAACATTTTTTGGCAGCTCCTTTCCATGGTCCAATAGTCATCATATAACTTCTGAGAATGATTGTCCAATGGAGAGATGGATTCATATTGGATGTAAGGTAACAGCGAATTTCATTTGCCTTTACTTCAATGGGAAGCCTTCCAACAACATGCCACTTTCTTCTTCATATGATGATCTTAATCTTGATAAGTTCAAGAAAGTTATTTTGGCTGGCAGTAGTGAAAATGATAGCAAGTTTCAAGGTTTTGTTTATAATGCATGTGTCTTACCTTTGCCAGTTTCCATAAAAGATGATTTTGATAAGAATCCGCCGCTAAAGTTATCTGTTAATGGTTTATGCACTTCTGATGCCGTTGAAGTAGGCAGTGACGGTGTTTGGAATGTTGTTGGCGGTAAGGCTTCTTGTCGGAGGAATTTTTCTCTCGAGGTTATTCTATCTGATGCTGTTGGTCGTGTTGTACATAAGGACATGGAGATCATTGCTTCACTTGTGTATGCCGATAATGGAACTCCTGTTGAGAAAGCTCTTGATAATCCTGAACCTCCTCTGTTGGTTGGCTGTGAGGGATTTGAGCACCCTTCTACAGAAAAACCAATAGCACTTTTTCTTGGCCGTGCGACCTTTAAGCTTAAAATATCTCAGCTTTCCTCCAAGTCTGATAATAGGCTATTCAGTATTTGTTTCCGCATGTCACTAGCTGAATGTCACCCATTTTTTGAAGTATATTCTCCTCCAATTCGTTGCATATCAAGAAGCCGCTGTGTCCGGCCAGCTGTCATTGGAAAAAGGCAGGCATCATTATCTCCAATTTATGACAGGTCTTATATTCCGGGATTCAATGATAGATTTCAAGAAATACCTGATCATATAGGGAATGGTGAAATAGTAAGCCATAGGAAGCATGCTAATGGCACATCATCTAAGCGTTCCAAAGTAGGTTCGGATAAATCATCTGCACAAGTTGCAAATGGGAGCATAGGGAAGGATGCGATGGTGTTCAAGGCAGACTTGGAAGCAAGATCAAATGATCTGGAGGGGATGGACAACTGCCCTTCTGATTCAGAAAGTGTTGATGCTCGGAAATCCGAAGTCAAATGGATAAGAGAAGTTGTAGATCCTACTTCAGATAGAGTGATATTTAGGTACTGCTTGGAAGGTACATGCGAACGTTCCTTGCTACTCAAAGAGATCATAAAATCCTCAAGCAATGTAGAATTGACAGCTTTTGCGGAGCAGGTTTGCCTGTATTCTGGATGTTTACATCATAGGTACCCTATATTGATATCAAAACAATTGATTCAAGAAGAAAATGATGTTTGGAACTCAATTTGTCAAAATGGTAATAATCGTGCCCTTTGGCTCACAGCAGCTCTCGAGATAAACAAAAGATTCATGAGCATTTCGTGCTCTGCAAACCGAGGCTTATCCGTAAAGGATTTTGAGGTTTTGCGGGGAATTGCGGGGTGCGGTGAGGAGATGAGTCTGGAAGATTTCAATAGAGTGTGGGAGTGGTTATATCCGGTTGCCGTTGCCCTATCCAAAGACCAGATAAATGCTTTGTGGGAGTGTGCATGGCCGAAATGGATAGAAGGGTTTATTACAGCAGAAGAGGCCGAGAGGTCTCTGAAGGGCGGCATATCAGGAATGCAGCAGCCAGGAACCTTTGTGCTCAGGTTCCCAACTTCTCGCAGCTGGCCTCACCCAGATGCTGGCAGCCTGATTGTTACTTACATTGGTGCTGATTTTATTATTCACCATAAGCTTCTTTCTCTGGATCACAGCAAGAAGAGCGGAGCAGAATTGCTGCAGAACTTGCTTTTGAAAGAACCGGAGCTGTCGCAATTGGCAAGGGTTGTTGGGTAAGCAGCTAAAATCGCTTGGAAGGTGCAGTTTTGGGACAAGTAGGAAATGGCTATTCTTGTTCTTGTACATTGAAGGCATGGAGGACCGCAAATTAGGTGCTGCTTCATGCCAGTGTTGGCAAATTATTTGCAGTTGTAATATAT

Network for GWHGAAEX014829

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	STAT

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.410
SRP064423	SRR2545915	Juvenile tuber	7.240
SRP108465	SRR5643513	five period of Gastrodia elata	8.010
	SRR5643514	five period of Gastrodia elata	6.020
	SRR5643515	five period of Gastrodia elata	6.990
	SRR5643524	five period of Gastrodia elata	6.870
	SRR5643525	five period of Gastrodia elata	7.550
	SRR5643528	five period of Gastrodia elata	7.330
	SRR5643658	five period of Gastrodia elata	7.490
	SRR5643659	five period of Gastrodia elata	5.400
	SRR5643660	five period of Gastrodia elata	4.610
	SRR5643661	five period of Gastrodia elata	5.170
	SRR5643662	five period of Gastrodia elata	4.080
	SRR5643663	five period of Gastrodia elata	4.190
	SRR5643664	five period of Gastrodia elata	4.090
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.270
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.160
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	8.200
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.190
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.790
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.480
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.900
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.730
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.680
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.660
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.400
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.400
SRP279888	Gastro	Gastrodia elata tuber	7.65
	Juven	Juvenile tuber	3.80
	Mother_Gastro	Mother tuber of Gastrodia elata	7.75
	Mother_Juven	Mother tuber of Juvenile	5.19