Detail information of GWHGAAEX014834/evm.TU.scaffold_63.2
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|325959049|ref|YP_004290515.1| | 2.00E-85 | sugar transporter [Methanobacterium sp. AL-21] |
| KOG | KOG0254 | 0 | Predicted transporter (major facilitator superfamily) |
| nr | gi|743800583|ref|XP_010926012.1| | 0 | PREDICTED: plastidic glucose transporter 4-like [Elaeis guineensis] |
| Swissprot | tr|Q56ZZ7|PLST4_ARATH | 0 | Plastidic glucose transporter 4 |
| trEMBL | tr|M0T147|M0T147_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P23720_001} |
| TAIR | AT5G16150 | 0 | plastidic GLC translocator |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000062 | 44256 | 77039 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014834
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00083.23 | Sugar_tr | 114 | 545 | 7.90E-103 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
| GO:0016020 | Cellular Component | membrane |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 29.360 |
| SRR2545915 | Juvenile tuber | 24.970 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 30.250 |
| SRR5643514 | five period of Gastrodia elata | 42.570 | |
| SRR5643515 | five period of Gastrodia elata | 37.010 | |
| SRR5643524 | five period of Gastrodia elata | 41.970 | |
| SRR5643525 | five period of Gastrodia elata | 33.900 | |
| SRR5643528 | five period of Gastrodia elata | 28.780 | |
| SRR5643658 | five period of Gastrodia elata | 29.940 | |
| SRR5643659 | five period of Gastrodia elata | 36.940 | |
| SRR5643660 | five period of Gastrodia elata | 41.310 | |
| SRR5643661 | five period of Gastrodia elata | 43.690 | |
| SRR5643662 | five period of Gastrodia elata | 34.000 | |
| SRR5643663 | five period of Gastrodia elata | 37.550 | |
| SRR5643664 | five period of Gastrodia elata | 36.010 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 47.920 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 42.470 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 55.710 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 44.770 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 51.930 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 53.280 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 52.440 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 51.730 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 72.050 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 69.350 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 59.160 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 59.160 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 34.73 |
| Juven | Juvenile tuber | 31.39 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 30.85 | |
| Mother_Juven | Mother tuber of Juvenile | 25.88 |