Detail information of GWHGAAEX014840/evm.TU.scaffold_63.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|332666557|ref|YP_004449345.1|7.00E-143beta-galactosidase [Haliscomenobacter hydrossis DSM 1100]
KOGKOG06260Beta-glucosidase, lactase phlorizinhydrolase, and related proteins
nrgi|84316715|gb|ABC55716.1|0beta-mannosidase 3 [Oncidium hybrid cultivar]
Swissprottr|Q5QMT0|BGL01_ORYSJ0Beta-glucosidase 1 (Precursor)
trEMBLtr|Q2MV12|Q2MV12_ONCHC0Beta-mannosidase 3 {ECO:0000313|EMBL:ABC55716.1}
TAIRAT3G180800B-S glucosidase 44

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000062227099232064-
Transcript Sequence

Network for GWHGAAEX014840

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00232.17Glyco_hydro_1485134.60E-161
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH1
Carbohydrate-Active enzymes FamilyGH1

KEGG pathway

KO Enzyme pathway mapID
K05350bglB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms78.280
SRR2545915Juvenile tuber202.300
SRP108465SRR5643513five period of Gastrodia elata114.550
SRR5643514five period of Gastrodia elata84.460
SRR5643515five period of Gastrodia elata107.600
SRR5643524five period of Gastrodia elata97.350
SRR5643525five period of Gastrodia elata11.600
SRR5643528five period of Gastrodia elata17.190
SRR5643658five period of Gastrodia elata14.340
SRR5643659five period of Gastrodia elata129.580
SRR5643660five period of Gastrodia elata85.020
SRR5643661five period of Gastrodia elata128.240
SRR5643662five period of Gastrodia elata37.860
SRR5643663five period of Gastrodia elata69.020
SRR5643664five period of Gastrodia elata30.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1115.190
SRR6049655Rhizomagastrodiae_C368-T10_good_1127.060
SRR6049656Rhizomagastrodiae_C368-T07_good_1143.400
SRR6049657Rhizomagastrodiae_C368-T07_good_192.750
SRR6049658Rhizomagastrodiae_C368-T04_good_170.130
SRR6049659Rhizomagastrodiae_C368-T04_good_150.220
SRR6049660Rhizomagastrodiae_C368-T01_good_1100.080
SRR6049661Rhizomagastrodiae_C368-T04_good_1100.750
SRR6049662Rhizomagastrodiae_C368-T01_good_1162.770
SRR6049663Rhizomagastrodiae_C368-T01_good_1129.200
SRR6049664Rhizomagastrodiae_C368-T10_good_1147.300
SRR6049665Rhizomagastrodiae_C368-T10_good_1147.300
SRP279888GastroGastrodia elata tuber 22.28
JuvenJuvenile tuber35.45
Mother_GastroMother tuber of Gastrodia elata 4.64
Mother_JuvenMother tuber of Juvenile 8.86