Detail information of GWHGAAEX014841/evm.TU.scaffold_63.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|126701126|ref|YP_001090023.1|8.00E-46peptidyl-tRNA hydrolase [Clostridium difficile 630]
KOGKOG22551.00E-102Peptidyl-tRNA hydrolase
nrgi|743772238|ref|XP_010916423.1|9.02E-118PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like isoform X2 [Elaeis guineensis]
Swissprottr|Q9M5P4|CRS2_MAIZE1.00E-109Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic (Precursor)
trEMBLtr|M0T146|M0T146_MUSAM6.00E-116Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P23710_001}
TAIRAT5G161401.00E-102Peptidyl-tRNA hydrolase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000062233171241219+
Transcript Sequence

Network for GWHGAAEX014841

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01195.18Pept_tRNA_hydro532312.10E-44
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0004045Molecular Functionaminoacyl-tRNA hydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.790
SRR2545915Juvenile tuber12.770
SRP108465SRR5643513five period of Gastrodia elata15.350
SRR5643514five period of Gastrodia elata13.760
SRR5643515five period of Gastrodia elata13.420
SRR5643524five period of Gastrodia elata17.430
SRR5643525five period of Gastrodia elata4.210
SRR5643528five period of Gastrodia elata2.160
SRR5643658five period of Gastrodia elata3.770
SRR5643659five period of Gastrodia elata8.780
SRR5643660five period of Gastrodia elata8.080
SRR5643661five period of Gastrodia elata10.250
SRR5643662five period of Gastrodia elata8.020
SRR5643663five period of Gastrodia elata6.720
SRR5643664five period of Gastrodia elata5.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.410
SRR6049655Rhizomagastrodiae_C368-T10_good_114.800
SRR6049656Rhizomagastrodiae_C368-T07_good_117.960
SRR6049657Rhizomagastrodiae_C368-T07_good_111.440
SRR6049658Rhizomagastrodiae_C368-T04_good_111.050
SRR6049659Rhizomagastrodiae_C368-T04_good_17.970
SRR6049660Rhizomagastrodiae_C368-T01_good_113.520
SRR6049661Rhizomagastrodiae_C368-T04_good_110.350
SRR6049662Rhizomagastrodiae_C368-T01_good_116.310
SRR6049663Rhizomagastrodiae_C368-T01_good_113.500
SRR6049664Rhizomagastrodiae_C368-T10_good_116.970
SRR6049665Rhizomagastrodiae_C368-T10_good_116.970
SRP279888GastroGastrodia elata tuber 5.18
JuvenJuvenile tuber13.16
Mother_GastroMother tuber of Gastrodia elata 3.37
Mother_JuvenMother tuber of Juvenile 3.00